| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2388 |
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| Symbol | rps13p |
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| ID | 7272110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2530172 |
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| End bp | 2530627 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570990 |
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| Product | 30S ribosomal protein S13P |
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| Protein accession | YP_002467392 |
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| Protein GI | 219852960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.656616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAAG AAGAAGAGGA CATAAAATAC TTTGTACGGG TCAGCAACAC TGACCTCGAC
GGGACCAAGT CAGTCAGGGT AGCCCTGACT GGGATCCCTG GTGTCGGTAG GCACACCTCT
GGGATTATCA CCCGCCGTGC AGCCGTCAAC GAACATGAAC TGCTCGGTCG CCTTCCCGAT
GGGGACGTCG ACCGGATCCG CGATGTCGTC ACTGACTATG GTGCGCTGAT CCCTGCGTGG
ATGCGCAACC GTATCAAGGA CGTCTATACT GGCGAGAGCA AGCATATCCT TGGTTCAGAC
CTTGCGATGA CCAACGATGA GGACGTGAAC CTTCTTCGGA AGATCCGATG TTACCGTGGT
ATCAGGCATG AGACCGGACA GAAGGTGCGC GGACAGCGGA CCAAGTCTAC TGGTAGAACC
GGCACCACTG TCGGCGTGAA GAGGAAGAAA GACTAA
|
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| Protein sequence | MAQEEEDIKY FVRVSNTDLD GTKSVRVALT GIPGVGRHTS GIITRRAAVN EHELLGRLPD
GDVDRIRDVV TDYGALIPAW MRNRIKDVYT GESKHILGSD LAMTNDEDVN LLRKIRCYRG
IRHETGQKVR GQRTKSTGRT GTTVGVKRKK D
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