| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2368 |
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| Symbol | |
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| ID | 7272089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2511098 |
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| End bp | 2513707 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570969 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002467372 |
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| Protein GI | 219852940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.232171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA TCAGCATAAA TCCGGTTAAA AACCATGGAA TCCGGTCAGT CGGGCTTATC
CTTATGCTTC TCCTCCTGGT GCAGGGTGCC GCAGCCGCTT CGGTGCTGGT CGCGGCATCA
GATAGCAGTG CATCAGCAAG GAGTGCAGCT GATTATCGCT GTGATGGGAG TAGCGATCAG
GTCCAGATCA ACCAGGCCCT CGACAGACTC GCCGGCTCCG GCGGGGTCGT AAACCTCGCG
GCAGGGACGT TCCACTGTGA TAACTTCATC TATGTACCGG GAGCGATCAC CCTGACTGGC
CAGGGCGAGG GAGGGACCAC CATCGAAATG ATCAATTCAG GGGAGACCGA TCTCCCGATC
ACGGTCAACT CCCCCGAGGT CAGCCTCTCC TCGTTCACCC TTCGTGGCAC CGGTTACATC
AAGATTACAA CCAGCCAAGT AACTGTGACA GATGTAGCCG CGACCAACAT CGGCACCAAC
GGTCACCGCT ACCCTGCCGG CGGCAACGGG ATGTTTTTTA TCTGGGCCGA TGGGACACAT
AACATCGAGG ACGTCTCCTT CATCAACTGC AGGGCCGTGG ACTGCAACAC CCACGGGTTC
AACCTGAATG CAAAGGGAAC CGCTCCGAAG GAAACCAGGA ACATTCGGTT CATCAACTGT
CAGGCGACCC GCTGTGGGTT TGGGGCAGAG TCACGGGACA CCGATATCAC CGGCTTTGAC
CTGCAGGAGG AGAACGATGT CTATGATATC CAGCTGATCG GGTGTATCGC CGACGACAAC
TGGGAATCCG GGTTCCACTT CGAACCGGGC GAGGATGAGA CACCCCCGAC TGTCAAACAG
GGGATCGTGA TCCGCGACTG CATAAGCAGG AACAATGGGC AGCGGAACAC GCTGACCTAT
CCGTACCACA CCTTCATGTC CGGCTTCTTT GTCTCCCGGA ACGCGGTGTT AACAAACTGT
AAGGCGATCA ACAACCGGAA CGCCGGCTTC TTCGTCCAGG GCGGGAGGAA CATCATCTTC
AACGACTGCA CCGACGATGG ATCCTCCTAC GGCTGGAAGA TCGTCAAATG GAGCTCAGGG
GTCACACTGA ACGACTGCAC GGCCTCGGAC AACAAGATAT GGGCGCTCTG GTCCGCGTTC
GCCGACCACA TCACCCTGAA CCGGTTCGTG CAGGACAATG CAGGGGGACT CTACGGAACC
CAGTCGATGC TCGGGTGGTA TTATGGCGAG CCCGCCTACG AGCAGCCGGT GAACGACTCG
TACTTCGACA TCACCGCCTA TGGCAATCAT GCACTCCCGA TCATAAACTT CAATGGAACC
GGGAACATCT ACTACCTCCG ATGGGGCGAC TGGCCGGGCC AGAACGGCAC TGCCCCGCCG
CCGACATCCC CGGCCCAACC GAACGCATCC TTCATCGCCT CACCCTCGAC CGGGTTCGCC
CCGCTTGCGG TCCAGTTCAC CGATACCACC ACCGGGGTTC CAACCGACTG GTACTGGGAC
TTCGGAGATG GGACCACATC CAGCGAACAG AATCCATCCC ATACCTATAC ACAGGACGGA
CTCTGGACAG TCACCCTCCA TGTAGGTAAC GCTCTCGGAG ATGCGAGTAC GCAACAGACC
GTGGCCATCG GGACGAATCC CCATGCAGGG TTCACGACGA CGGATCGGCG GGTGATCGAT
GCCGGTGGTA CGATCCACTT CACTGACACC TCCACTGGCC ACCCAAACAG TTGGTTATGG
GATTTCGGAG ATCTCACCAC TTCAACCGAC GAGAATCCGA TTCACCGGTT CCTGACCGCA
GGGATCTTCA TGGTAAAACT TATCGCCACC TATGGGGCTG GAACCGACAC CGAGGTGAAG
AGCAGTTACA TCACCGTCTA CCCGGTGGCG CAGATGGGCG TCGATGTGAG CGACGGGGCA
GCACCAATGA CGGTCCACTT CACCGACCGG TCGTACGGCT CGCCATCGTC ACGCCTCTGG
GACTTCGGGG ACGGATCCAC CTCGATCGAG CAGAATCCGG TCCATATCTA TCCTTACGGT
GGAACATATA CGGTGACGCT GACGGTGGAG GGGATAAATG GTGGACCGAT CGATCGCGCT
ACCGCCACCC TCTCAGTGAC CGGCGCACCA TCGGCCAGTT TCACGGCGAC GCCGGCCGGC
ACTACCCCAC CGGTAACAGT CACGTTCCTG GACCGGTCGA TCGGACAGAT CGATAGTAGA
TTCTGGTCGT TCGGCGACGG AACCACCTCG ACCGAGCAGA GCCCGGTCCA TACCTATTCA
AATGCCGGAA CCTACAATGC GACGCTGACG ACGAGCAATC GCTGGGGGAG CAGCAGCACA
ACGTTGCAGG TCAATGCAGG CGACCCACCC TATTCTCCAA TCCAGGGGGT TATCGCACTT
CCAGGACAGA GCGCACTGCC AACGGACCCA AATCGCGAGA GGTTATATAA AGATCTGAAT
GGAGACGGGG CGATCAACTT CAACGACGTG GTGCTTTACT TCAACGAGAT GGATTGGATC
TCAGATAATG AACCTGTTTC AGCCTTTGAT TTCAATAAAA ACGGGAAAAT CGACTTTGAT
GACATCGTCT TCCTCTTCAA TCTACTCTGA
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| Protein sequence | MKQISINPVK NHGIRSVGLI LMLLLLVQGA AAASVLVAAS DSSASARSAA DYRCDGSSDQ
VQINQALDRL AGSGGVVNLA AGTFHCDNFI YVPGAITLTG QGEGGTTIEM INSGETDLPI
TVNSPEVSLS SFTLRGTGYI KITTSQVTVT DVAATNIGTN GHRYPAGGNG MFFIWADGTH
NIEDVSFINC RAVDCNTHGF NLNAKGTAPK ETRNIRFINC QATRCGFGAE SRDTDITGFD
LQEENDVYDI QLIGCIADDN WESGFHFEPG EDETPPTVKQ GIVIRDCISR NNGQRNTLTY
PYHTFMSGFF VSRNAVLTNC KAINNRNAGF FVQGGRNIIF NDCTDDGSSY GWKIVKWSSG
VTLNDCTASD NKIWALWSAF ADHITLNRFV QDNAGGLYGT QSMLGWYYGE PAYEQPVNDS
YFDITAYGNH ALPIINFNGT GNIYYLRWGD WPGQNGTAPP PTSPAQPNAS FIASPSTGFA
PLAVQFTDTT TGVPTDWYWD FGDGTTSSEQ NPSHTYTQDG LWTVTLHVGN ALGDASTQQT
VAIGTNPHAG FTTTDRRVID AGGTIHFTDT STGHPNSWLW DFGDLTTSTD ENPIHRFLTA
GIFMVKLIAT YGAGTDTEVK SSYITVYPVA QMGVDVSDGA APMTVHFTDR SYGSPSSRLW
DFGDGSTSIE QNPVHIYPYG GTYTVTLTVE GINGGPIDRA TATLSVTGAP SASFTATPAG
TTPPVTVTFL DRSIGQIDSR FWSFGDGTTS TEQSPVHTYS NAGTYNATLT TSNRWGSSST
TLQVNAGDPP YSPIQGVIAL PGQSALPTDP NRERLYKDLN GDGAINFNDV VLYFNEMDWI
SDNEPVSAFD FNKNGKIDFD DIVFLFNLL
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