| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2347 |
|---|
| Symbol | |
|---|
| ID | 7272068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2490749 |
|---|
| End bp | 2491465 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643570950 |
|---|
| Product | protein of unknown function DUF169 |
|---|
| Protein accession | YP_002467353 |
|---|
| Protein GI | 219852921 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2043] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.547457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.341579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACTC TATCAAAAAC TGTGGATTAC GCAGCCGGCG CAGCTGCCCT GATCTCTCTG
TTGGGACTCT CTGGCTCACC GGTGGCCATC CGGTTCGCAG CGACAAAGGA GGCGGTTCCT
GAAGGGATCG ACGAGGTGCC TGAGACAATC CGGCACTGTA GTATGGTAAA TCTGGCACGC
AAGGAAGGGA AGATCTTTTC TGCGACTGCG GAGAAGCACC TCTGCAACGG TGGTGCCTGG
TCGCTCGGGC TCAGGCCGAT CACCCAGAGT CTTCGGGACG GGGAGTTCTA CTACAAACTC
GGCAAGTTCG AGTCAGACGC TGCCTGCAAG CGGACGATCG ATCAGATCCC GCGTCTGGAG
ACCGGTTCCA CCTATGCAAC GCTCTACGCC CCGCTCGAAA AGACTCCGTT CATCCCTCAG
GTGATTGTGA TCATCGCCAA CCCGTTTGCG ATGCTGAAAC TGGCCCAAGC CTCCCTGTAC
CACCTCGGCG GCCGGCTGCA CCCCTCATTC GCCGGGATCC AGTCAGTCTG CGCCGATGTG
ACCGCCAACA CCTACCTCAC CGGAGCGGTC AACATCTCGC TCGGCTGCGA CGGGTCACGG
AAGTTCTCGG GGATCGCCCC TGACGAGATG GTGATGGGTT TTCCAGCAGA ACAGCTCGGC
GAGATCGTCG ACGCATTGAA GATCGTCTGC GCCGCACCAG GTTCGCAGAA GAAATAA
|
|---|
| Protein sequence | MITLSKTVDY AAGAAALISL LGLSGSPVAI RFAATKEAVP EGIDEVPETI RHCSMVNLAR
KEGKIFSATA EKHLCNGGAW SLGLRPITQS LRDGEFYYKL GKFESDAACK RTIDQIPRLE
TGSTYATLYA PLEKTPFIPQ VIVIIANPFA MLKLAQASLY HLGGRLHPSF AGIQSVCADV
TANTYLTGAV NISLGCDGSR KFSGIAPDEM VMGFPAEQLG EIVDALKIVC AAPGSQKK
|
|---|
| |