| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2290 |
|---|
| Symbol | |
|---|
| ID | 7270551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2440803 |
|---|
| End bp | 2441462 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643570896 |
|---|
| Product | uncharacterized membrane protein |
|---|
| Protein accession | YP_002467299 |
|---|
| Protein GI | 219852867 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2364] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.360161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTAACCT CTCATACTCT CAAAAGAGGG ATATTATTAC TGATTGGTTT ATTTTTCATG
GGTCTGGGAA TTAGTCTGAT CACACGATCG TACCTGGGGA CATCTCCCAT TTCGAGTGTT
CCCTATGTGC TCTGTCTGAT ATTTCCTATC ACCTTTGGAG GATTTGCCTT CTTGCTGGGT
CTTCTCTTTT TAGTCATGGA GATCCTTATA CTGGGTAAGG ATTTCCCAAA AAAACAACTT
CTTCAACTTT TTATCGGCGT ACTTCTGGGT GTTTTCATCG ATGTAGGAAT GTACCTCTCC
GCCTTTGTAA ATCCGGAATT TTATGCTGCA AAGATCGTCA CGTTACTCCT CGGCTGCATT
GTTCTTGCTC TGGGAGTTTA TCTGGAAATA TCGGCCAATT CATTCCTGTA TCCTGCCGAT
GCCATTGTGA AGGTAATTGC TCAGAAATCG GGAAAGAAAT TTGGAACCAC AAAAATTATG
TTTGATTCCA CGTTGTGTTG CGTTGCAGGA CTTATTTCAC TCTCTGTATT CGGGACAATT
AAAGGCCTGG GGGAGGGAAC TGTCATATCT GCTTTACTAG TCGGGTATAT CATAACCGGA
ATCAGCACCA TCTTTTTTCA GTTCAATAGC AAAAAGGAGT TGTTGCATTC TGATCACTGA
|
|---|
| Protein sequence | MLTSHTLKRG ILLLIGLFFM GLGISLITRS YLGTSPISSV PYVLCLIFPI TFGGFAFLLG
LLFLVMEILI LGKDFPKKQL LQLFIGVLLG VFIDVGMYLS AFVNPEFYAA KIVTLLLGCI
VLALGVYLEI SANSFLYPAD AIVKVIAQKS GKKFGTTKIM FDSTLCCVAG LISLSVFGTI
KGLGEGTVIS ALLVGYIITG ISTIFFQFNS KKELLHSDH
|
|---|
| |