Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2277 |
Symbol | |
ID | 7272575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2431658 |
End bp | 2432827 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643570886 |
Product | hypothetical protein |
Protein accession | YP_002467289 |
Protein GI | 219852857 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.244625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCC TGACTGTTCT CAACGGGCTG CTGGCCGGGT TGCTGTTGAT CGCCACTGCA ACGGCCGCAC CGGTTATAGA AGGGTGCCCG ATCTTCCCGC CGGATAATGT CTGGAACACC CGAATCGATA CACTCCCGAC CGACGCCTAC TCGGCAGCTT ACATCTCGAC GATCGGCTCG TCCAGGCCGG TCCACCCGGA CTTCGGGTCA GGGACCTGGG AAGGCGGTCC GATCGGGATC CCGTACGTGG TGGTCAACGG GTCCCAGCCG GCAGTCCCGG TCTCGTTCTA CTATCCGGAC GAGAGCGACC CCGGGCCGTA CCCGGTCCCA TCGACAGCGC CGGTGGAAGG GGGTTCGGAG GCCACCGGGG ACCGGCATGT GCTGGTGATC GACCGGGACA ACCACCAACT CTATGAACTC TACGACGCGC ACCTGCAGTC CGACCGCTCC TGGGATTGCG GGTCAGGGGC GGTCTTCGAC CTGAACTGCT CCGCCCTCCG CCCGGTCGGC TGGACCTCAG CCGATGCCGC AGGGTTGCCG ATCCTCCCCG GGCTGGTCAG GTACGACGAG GTGGCCGACG GGGCGATCAC CCATGCGATC CGGTTCACAG CCCCCCAGAC GAGGGGAGCG TACATCTGGC CGGCACGTCA CGAGGCCTCC TCGCTGACCG GCAGCCAGTA TCCTCCACTC GGGCAGCGTT TCCGGCTGAA GGCCGACTAT GACATCAGTG GGTTTTCGCC GGAGGTGCAG GTAATTCTGA CCGCACTAAA GGAGTACGGG ATGATTCTGG CAGACAATGG ATCATCATGG TACCTCTCCG GAGCCCCAGA TGAGCGATGG AATAACGATC TCCTCCACGA ATTGCAGCAG GTGAAGGGGT CTGCCTTCGA GGCCGTCGAC GAGTCCTCCC TGATGATCAG TCCGGATTCG GCAGCGGCCC GGCAGCGGCC GTTGTTGATT CCAGGCGGGA AGATGATCCC GTCCGATCCG GACCTGGACG GGCGGTACGA GGACCTGGAC GGCAGTGGGG TGGCCGACTT CTCTGATGTG GTCCTCTTCT TCAACCAGAT GGACTGGATC GGCGAAGACG AGCCTGCCGG CCTCTTCGAC TTCAATGGAG ATGGTCGGGT CGACTTCGAT GATGTCATCA GGGTCTTTGG GATGCTCTGA
|
Protein sequence | MIRLTVLNGL LAGLLLIATA TAAPVIEGCP IFPPDNVWNT RIDTLPTDAY SAAYISTIGS SRPVHPDFGS GTWEGGPIGI PYVVVNGSQP AVPVSFYYPD ESDPGPYPVP STAPVEGGSE ATGDRHVLVI DRDNHQLYEL YDAHLQSDRS WDCGSGAVFD LNCSALRPVG WTSADAAGLP ILPGLVRYDE VADGAITHAI RFTAPQTRGA YIWPARHEAS SLTGSQYPPL GQRFRLKADY DISGFSPEVQ VILTALKEYG MILADNGSSW YLSGAPDERW NNDLLHELQQ VKGSAFEAVD ESSLMISPDS AAARQRPLLI PGGKMIPSDP DLDGRYEDLD GSGVADFSDV VLFFNQMDWI GEDEPAGLFD FNGDGRVDFD DVIRVFGML
|
| |