Gene Mpal_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2250 
Symbol 
ID7272547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2397745 
End bp2398908 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content57% 
IMG OID643570862 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_002467266 
Protein GI219852834 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.432812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCGA CAAACACATC AAGACTCAGG AAATTTGTAT CTCCAGAGTT TGTCTACGGT 
AGCGGTGCTC GTATGCTCGC CGGGCAGTAT GCTCGGAACT TCGGGGCCAG AAAGGTGTTG
CTGGTTACCG ATCCCGGGGT GGTCAGAACC GGATATGTAG ATGAGGTGGT ACAGACGCTG
ACCGAGGTCG GTGTCAGTGT TCATCTCTTT GATCAGGTCT CTTCTAATCC CCGGGTGGAA
GAGGTGATGG AAGGAGCACT GCTGTATCAG GCTGGCGGAT GCAATGGAAT CGTCGCAGTG
GGAGGTGGAT CGGCCATCGA CTGTGCAAAG GGGATCGGGA TCGTCTCAGC ACACCACGAG
CATATTATCT CTTTTGAAGG GGTTGACCAG GTGAAGAGGC CTGGTCCACC CCTTGTCTGT
GTTCCAACCA CCGCCGGCTC TTCAGCAGAT CTCTCACAGT TTGCGATCAT CTATGACCAG
ACCAGGCGTC GGAAGTTCGC GATCATCAGC AAGGCAATCG TCCCCGATGT CTCGCTGATC
GACCCGGATA CCCTGATCAC CCTCCCGTCG CACCTGATCG CAGTGACCGG GTTCGACGCC
CTGGCCCATG CCATCGAGGC CTTTGTCTCC AACGCCAGTT CCCCGATCAC CGATCTCCAG
GCCCTGGCGG CGATCCGGCT GCTGGCCACT ACCCTTCCAC AGGTAACTGA AAGCACCACA
AATGGACAGC GGGAGAGCCT GATGCTTGCG AGCCTAGAGG CAGGACTGGC CTTCTCGAAT
GCGAGCCTCG GGGCCTCCCA TGCAATGGCT CATGCCCTCG GCGGTCTTCT GGACATCCCA
CACGGGGTCT GCAATGCCAT CCTCCTCGAA AAGGTCGTCG CATTCAACTT CTCTGCGGTA
CCGGAACGAT ACACCCGTAT CGGAGAGATA TTTGGGCTGG ATCTCAAGGA TAAATCTGAC
CAGGAAGTGA AGGAGTCGGT CTGCGCCGGG ATCAGGGGAC TGGCCGCAGG CATTAAGGAT
ATGCCGGATC TCAAAATGCT TGGGGTAACC AGGGACGTGA TCTCGTTAAT GGCTGCCGAT
GCTATGGAGG ACCCCTGCAT GGTCACCAAC CCAAAGAAGC CGACGGTGGA AGAGATCGAG
GCGATCTATG AAGAACTCCT CTGA
 
Protein sequence
MIPTNTSRLR KFVSPEFVYG SGARMLAGQY ARNFGARKVL LVTDPGVVRT GYVDEVVQTL 
TEVGVSVHLF DQVSSNPRVE EVMEGALLYQ AGGCNGIVAV GGGSAIDCAK GIGIVSAHHE
HIISFEGVDQ VKRPGPPLVC VPTTAGSSAD LSQFAIIYDQ TRRRKFAIIS KAIVPDVSLI
DPDTLITLPS HLIAVTGFDA LAHAIEAFVS NASSPITDLQ ALAAIRLLAT TLPQVTESTT
NGQRESLMLA SLEAGLAFSN ASLGASHAMA HALGGLLDIP HGVCNAILLE KVVAFNFSAV
PERYTRIGEI FGLDLKDKSD QEVKESVCAG IRGLAAGIKD MPDLKMLGVT RDVISLMAAD
AMEDPCMVTN PKKPTVEEIE AIYEELL