| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2184 |
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| Symbol | |
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| ID | 7270269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2322130 |
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| End bp | 2323092 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643570798 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002467203 |
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| Protein GI | 219852771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG CGATTATCAC CGGGATAACT GGACAGGACG GTGCGTATCT CAGTCAATTA
TTACTGAAGA AGGGATACCG GGTTATCGGG TTTGTGCGTA ACAGCAAGGG TTCCTCTCTG
ACTAAACTCT CCTACCTCAG AATCACAGAT CAGATCATCT TCGAGGAATG CAATCTGCTG
GATCTCGTAA ACATTGTCGG ATTGCTGAAG CGATATAAAC CGGATGAGAT CTACAATCTG
GCAGCCCAGA GTTCGGTCAA GGCGTCATTT GACCAGCCGA TCGCCACCAT CGAATTTAAT
ATAATCTCAG TGATTAACCT GCTTGAGGCG ATTCGGCTCG TCGACCAAAA GATAAAATAC
TACCAGGCAT CGAGCAGCGA GATGTTTGGC AAGGTCGACG ATCTTCCGAT CACGGAAAAT
ACCCCCATGC ATCCCCTCAG CCCATATGCA ATATCGAAGG CTGCAGCCCA TTGGATTGCC
ATCAATTACC GGGAGAGTTA TGGAATATTC ACCTGCTGTG GCATTCTCTT CAATCACGAA
TCAATTCTGA GAGATAAGAA TTTTTTCACA AAAAAAGTGA TCAACGATTC AATCGAGATC
TCACGATCCC AGAGGGGTGT ATTACGAGTT GGAAACATTG ATATCCGGAG AGATTTCGGG
TACGCCCCCC GATATGTTGA AGCGATGTGG TTGATGCTCC AGCATCCAAC CCCTGACGAT
TATATCATCT GCTCCGGTAA ATCCATCCAA CTCCGACAGA TCCTCCATCA TATCTTTAAA
AGACTGGGAA TTGATCAGAA CAAAATAATA ATCGATGAAT CCCTCTACAG GCCCACAGAG
ATCGAGAATA TCTACGGGGA TAATTCGAAA GTAAAAAAAG TTCTAGGCTG GGAATATACC
ACTGATTTCT TCGAAGTGAT CGATATTCTC ATCGATGAAC AGTTAAAATA TAAGACTGAG
TAG
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| Protein sequence | MKTAIITGIT GQDGAYLSQL LLKKGYRVIG FVRNSKGSSL TKLSYLRITD QIIFEECNLL
DLVNIVGLLK RYKPDEIYNL AAQSSVKASF DQPIATIEFN IISVINLLEA IRLVDQKIKY
YQASSSEMFG KVDDLPITEN TPMHPLSPYA ISKAAAHWIA INYRESYGIF TCCGILFNHE
SILRDKNFFT KKVINDSIEI SRSQRGVLRV GNIDIRRDFG YAPRYVEAMW LMLQHPTPDD
YIICSGKSIQ LRQILHHIFK RLGIDQNKII IDESLYRPTE IENIYGDNSK VKKVLGWEYT
TDFFEVIDIL IDEQLKYKTE
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