| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2165 |
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| Symbol | |
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| ID | 7270250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2299187 |
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| End bp | 2300170 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570781 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002467186 |
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| Protein GI | 219852754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.770952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCAA GATCCTGCAG TAAGCTCCCC TGGCTGGTCG TGTCAGGCTA CGGTGCCCAT
ATCAAGTCTA CTCCCCGTTT ACTTATCGTT CAGAAGAATG GGACCACCAC CGAGTACCCG
ATCGGAGATG TGCACCACCT GCTGGTGGTC GGTGGGCATA CGATCCATTC GGCAGTGTTG
CAGCATATGC AGAACGCAGG AAACTGGGTC TCTTTCTTCG CAGCTGACGG CACCCCCGTC
GGGCTTATCC GACCCCCTGA AGACAGGGTC GATGAACAGG TCCGTGCCAT CCAGCGGCAT
GCCCCTGCCC ACAGTTATGC ACTCGGGATC ACCAGAGCCG CACTTGGGAG AAGACTGCAG
GTGATCGGAG AGACGACCGT GGTCACCGGG GAGAGCCCGC TCTATCAGGG GGAACTGGAG
GTACTGCAGG ACGCGCGGCA GGAACTCGAA TACCTGGTCA CTCTCGATGA GATACGCAGG
CTCCACCGGC TGGCCACCGA CATGTACTAT GAGATCATGG CCCGCACGAT CCCCAAAGGA
ACCGGGTTTC GGCGGAGGAC AGCCCGGCCG TACATGGATC CCGTAAACAC GATGCTCTCG
TTCTCATATG GGATTCTCTC CGGAGTCTGC GCCGTTCATC TGGCAGGAGC ACACCTGGAT
GCCAATATCG GCCTGCTTCA CCAGGGGGAA CGAGCACTAG TGAGGGATCT TACAGAACTC
TTTAAACCGC AGATGGTCGA CCAGCCCATC TTCGCCCTGG TCAGACAGGG GATCACTGCA
AGCGATTATG AGATTGGGGA GAGCCGGTGC ACCCTCTCGG ACGCACTGAT CCGGCGAATG
CTACTGCACC TACAGACATC GATTGAAGTG ACAGCGATCG GCAGACAGGT AGAGATGCTC
GCCGATGCGC TGATCAGGAA TCGCGAATTC CAGATCCTCG ACCCTGCAGA GTTCTTACCC
CGCATCCCCC TGAAAAACCA TTAA
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| Protein sequence | MSPRSCSKLP WLVVSGYGAH IKSTPRLLIV QKNGTTTEYP IGDVHHLLVV GGHTIHSAVL
QHMQNAGNWV SFFAADGTPV GLIRPPEDRV DEQVRAIQRH APAHSYALGI TRAALGRRLQ
VIGETTVVTG ESPLYQGELE VLQDARQELE YLVTLDEIRR LHRLATDMYY EIMARTIPKG
TGFRRRTARP YMDPVNTMLS FSYGILSGVC AVHLAGAHLD ANIGLLHQGE RALVRDLTEL
FKPQMVDQPI FALVRQGITA SDYEIGESRC TLSDALIRRM LLHLQTSIEV TAIGRQVEML
ADALIRNREF QILDPAEFLP RIPLKNH
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