| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2143 |
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| Symbol | |
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| ID | 7271623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2277686 |
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| End bp | 2278906 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643570757 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_002467164 |
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| Protein GI | 219852732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGC TCGCTGAACG GATTCTGGGC GGAGCGGCCG GCACCTACCT GGACCGAAAG
ATCGATACCG CGTATGCCCA TGACGGGACC GGAGTCCTGA CCCTTCAGGC CTGGGAGGAG
ATGGGGGGTG GCATACCAGC CCATCCCGAG CGGTTACAGA TCCTCTTCGA CCACATCGTC
CCTGCCAACA ACAGCACCAC CGCCACCCTC CAGCAGAAAC TCCGGGCGTT CTCAAAGGGT
GCCGGTATCC GCTTCTCCGA CTGCGGGGAA GGGATCTGCC ACCAGGTGCT CGCCGAAGGA
GGGATCATCC CTGGAAACGT GGTGATCGGG GCCGACTCGC ACACCTGCAC GCTCGGGGCG
TTCGGCGCCT TTGCCACAGG TGTCGGGGCG ACCGACATGG CTGCAATCTG GGCATCGGGG
TGCATCTGGC TGAAGGTTCC CGAGACGATC AGGGTCGACC TTCAGGGGAG GCTGACTGGC
GCTGCCGAGC CCAAAGACCT GGCCCTCCGA TACGTCTCGC TCCTCGGGAT GGGCGGGGCC
ACCTACAAAG CCCTGGAGTT CACCGGGGAG GGGGCGGCCA CGATCCCGAT GGATGGAAGG
CTGACGATGG CCAACCTCGC CGTCGAGACC GGTGCCAAGG CCGGCCTCTT CTACGCGGAC
CAGGAGACCA GGCGATACCT GGCGGCATCT GGAAAAGATG TCGATGATGC GATCACCCAG
GTCCCTGAGG AGGGAAAATA CCTGGAGACC CTGGCGATCG ATCTCGCTGA TATCGAGCCG
CTGGTCGCCG TCCCCCACCG GGTCGACACA GTCCGACCGG TCGCCGACGT CGCCGGGCTC
CATCTGGATC AGGTCTTCCT CGGCACCTGT ACCAACGGTC GGTACCCCGA TCTGGCCAGG
TTCGCTGCGA TCGTGAAGGG GAAGAAGGTC GTCGTCCGGA CGGTGATCGT CCCGGCCTCG
CAGAAGGTGC TCATCGAGGC TGCCTCCACC GGCGTGCTCG CAGACCTGAT CGGTGCCGGC
TGCATGGTCG GTCCGCCAGG ATGCGGCCCC TGCCTCGGGG CTCATCTGGG GGTGATCGGA
GAAGGGGAGG TCTGCCTCTC AACGGCCAAC AGGAACTTCC TCAACCGGAT GGGGGTCGGG
GGATCGATCT ACCTCTCCTC GGTCAGCACA GCTGCGGCGA GTGCCCTCAC CGGCGAGATC
ACCAGTCCGG AGGGGATCTG A
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| Protein sequence | MSTLAERILG GAAGTYLDRK IDTAYAHDGT GVLTLQAWEE MGGGIPAHPE RLQILFDHIV
PANNSTTATL QQKLRAFSKG AGIRFSDCGE GICHQVLAEG GIIPGNVVIG ADSHTCTLGA
FGAFATGVGA TDMAAIWASG CIWLKVPETI RVDLQGRLTG AAEPKDLALR YVSLLGMGGA
TYKALEFTGE GAATIPMDGR LTMANLAVET GAKAGLFYAD QETRRYLAAS GKDVDDAITQ
VPEEGKYLET LAIDLADIEP LVAVPHRVDT VRPVADVAGL HLDQVFLGTC TNGRYPDLAR
FAAIVKGKKV VVRTVIVPAS QKVLIEAAST GVLADLIGAG CMVGPPGCGP CLGAHLGVIG
EGEVCLSTAN RNFLNRMGVG GSIYLSSVST AAASALTGEI TSPEGI
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