| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2118 |
|---|
| Symbol | |
|---|
| ID | 7271598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2249916 |
|---|
| End bp | 2251118 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643570732 |
|---|
| Product | WD-40 repeat protein |
|---|
| Protein accession | YP_002467139 |
|---|
| Protein GI | 219852707 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAC GTGCTTTTTT ACTGGTTTTC GTCTCGCTTC TCCTCATCCT TGTATCCATC
TCAAGTGTGC AGGCTCAGGA GCCGATCTGG ACCGAGACAA CCGATAAAAC GGTCTCATCA
TTGGCAATAT CTGGAAATGC AACCACTATC GCTGTTGGTG GGGAACATCT CTATCTCTTC
AACCAGAGTG GCCAGCAGAT GGGTGTGACC TGGAAGACCG AGGGTGTCGC GGTTAATCGA
AGCGGGGATC TGGTCGCTGC TGCAATGGAT GACGGTGTTC ACATGCTCGA TGTCAGCGGG
CATGATATCT GGGTTCTTCC GCTCCTATCA ACCTCCTGCG TGGCGATGAC TCCCAATGCG
AGTCAGATCG TCGCGGGTAC CAAAAAAGGG GTGATCGCCG GCATCGATAA GAACGGAGGC
CTGATCCACC AGGGTGAACT GACCTCCCTC TCCAGCGGGT CCAACGTGAT CTGGGCCGCT
GCTATGTCAG AGAATGGGAG CATGAATGTG GTCTCTGATA TAGATGGTCT CTATGCCTTT
GACGGGTCCG GACATGATCT CTGGCGCCTT GGTTTCATTC GCCCGGTCTC ACTTGGCATG
ACCTGGAACG GCAGCATGGT GGCTGCCGGT GGTACTTCGG GGGTGCTCAT CTGCAACCGC
ACCGGGGTGG AGATGGGGCG GTACTATAAA GGAAATGCCA TCACCACGGT CGCGGTCCCG
GTCAACGGCA CCTTCGCCAT TGCCGGGGAC GAGAAAGGGA CCCTGATCTA CCTCAACAGC
GCTGCCTGGC CGCAGTGGAC CTATCCGGCC GGTTCTCCGA TTACATCAGT GTCTGTCACC
GCGGATGGGG CCCTGATAGC GGCCGGCACG GAGGATGGTT CGCTGATGCT CTTTGGGAAC
AGTGGATATC TCTTCTGGAA GACGAAACTT CCGTCTTCGG TCACTGCGCT GGGTTTCTCT
CCGGACGGGT GGTACCTGGG TGCAGGGACC AGCACCGGGA CAGTGGCCCT CTTCCCGGGA
GAAGCCCGGC CAGTAGAGGC AGGCCAGACG AATGGGCAGA CGACAACAAC AACGACGAAT
ACCACGTCCG GTGGAATCGT CACCTATCCG ACCACCCATT CCACAGAATC TCCATCTCCT
GGAGTCGTCT GTAGTCTTCT TGTAATCACT GCGCTGCTGA TCAGGGTTAA ACGATCTTCA
TAG
|
|---|
| Protein sequence | MIGRAFLLVF VSLLLILVSI SSVQAQEPIW TETTDKTVSS LAISGNATTI AVGGEHLYLF
NQSGQQMGVT WKTEGVAVNR SGDLVAAAMD DGVHMLDVSG HDIWVLPLLS TSCVAMTPNA
SQIVAGTKKG VIAGIDKNGG LIHQGELTSL SSGSNVIWAA AMSENGSMNV VSDIDGLYAF
DGSGHDLWRL GFIRPVSLGM TWNGSMVAAG GTSGVLICNR TGVEMGRYYK GNAITTVAVP
VNGTFAIAGD EKGTLIYLNS AAWPQWTYPA GSPITSVSVT ADGALIAAGT EDGSLMLFGN
SGYLFWKTKL PSSVTALGFS PDGWYLGAGT STGTVALFPG EARPVEAGQT NGQTTTTTTN
TTSGGIVTYP TTHSTESPSP GVVCSLLVIT ALLIRVKRSS
|
|---|
| |