Gene Mpal_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2111 
Symbol 
ID7271589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2239660 
End bp2241135 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content61% 
IMG OID643570723 
Productpyruvate carboxyltransferase 
Protein accessionYP_002467132 
Protein GI219852700 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTG TTTTCGATAC CACCCTTCGG GATGGTGAGC AGACCCCTGG GGTCTCATTT 
AGTACAGCAC AGAAGCACAG CATCGCAGTG CAGCTCTCCG ATCTGGGAGT CCATACGATC
GAGGCCGGGT TCCCTGCCTC GTCTGCCGGT GAGCGCGAGT CGGTTCGGGC TATCGCGGCC
ATGAATCTGG ACGCGGAGAT CTGCGGCCTT GCTCGTGCCC TGAAGTCCGA TGTGGACGCC
TGTCTTGACT GTGACGTCGA TCTGGTGCAT GTCTTCATTC CGACATCCGA TATCCAGCGG
GTCAATACGA TCAAGAAGAC CCGCGAGCAG GTGCTGGCCA GCACCTCTGC GATCATCGAG
TATGTTCGGG AGCATCACGA CCAGTGCATG TTCTCGCCGA TGGACGCGAC CAGGACCGAG
CCGGCCTATC TGCTTGAGGT CTGCAAGGCC GCTGCCGCCG CAGGGGCGAC GATCATCAAC
CTCCCCGACA CCGTCGGGAT CGCCTCTCCG ACGTCGATGG CAGCCATGGT CCGCGGGATC
GCATCGGAGG TCGACCCGAT AATTGATGTC CACTGCCACA ACGATTTCGG ACTTGCGGTG
GCCAATACCA CCCTGGCCGT CGAGGCCGGG GCACGGCAGG TTCAAGTGAC GGTAAACGGC
ATCGGGGAAA GGGCCGGCAA TGCCGATCTC GCGCAGACTG TGATGGTCCT CGAATCGATC
TACGGGATCA AGACCGGGAT CAGGACCGAG AAGATCGTCG AGACCTCGAC GCTGGTCTCA
CGGTTCTCGG GGATTTCAAT GCCGCCGATG CAGCCGGTCG TCGGGGAGAA TGCGTTCTCC
CATGAATCCG GGATTCACTC GCAGGGGGTA CTCGCCAATT CGGCCACATT CGAACCGGGG
ATCATGACCC CTGAGATGGT CGGGCACCGG CGCCGGCTGA CGCTCGGCAA GCATGTGGGC
AGACACGCCG TCAGGCAGAT GCTCCTCGAT GCCCACCTTG AGACAACCGA TCAGCAGCTG
AACCTGATCG TCGAGAAGGT GAAGGCGATC GCGGACAAGG GGAAGAGAGT CACCGACTCC
GACCTCTATG CGATCGGTGA AGGGGTGCTC GGGATCGAGG AAGGGCCGAA GGCGATGGAC
CTTGCGGATA TCGCAATCAT GACCGGAAAC CATATGATCC CGACCGCCAG TGTCCGTGCG
ATCTGGCAAG GGGAGGAACG GGTGGTCAGC TGTGTCGGCA ACGGCCCGGT GGACGCCGCT
CTGAACGCCA TCGGCACGTT CCTTCCTGCC GAGGTCCGGC TGAAGGACTT CCGGATCGAA
GCGATATCGG GAGGGTCCGA TGCGATCTGC CATGTCACGA TCGCGGTCGA GGACCAGAAG
GGACGGATCG TCGATGCCGG GGCTTCAGGG GACGATATCG TCCTCACCTC GACAGAAGCG
ATGGTGAATG CGATCAACCT GCTCTACCGG CTCTGA
 
Protein sequence
MITVFDTTLR DGEQTPGVSF STAQKHSIAV QLSDLGVHTI EAGFPASSAG ERESVRAIAA 
MNLDAEICGL ARALKSDVDA CLDCDVDLVH VFIPTSDIQR VNTIKKTREQ VLASTSAIIE
YVREHHDQCM FSPMDATRTE PAYLLEVCKA AAAAGATIIN LPDTVGIASP TSMAAMVRGI
ASEVDPIIDV HCHNDFGLAV ANTTLAVEAG ARQVQVTVNG IGERAGNADL AQTVMVLESI
YGIKTGIRTE KIVETSTLVS RFSGISMPPM QPVVGENAFS HESGIHSQGV LANSATFEPG
IMTPEMVGHR RRLTLGKHVG RHAVRQMLLD AHLETTDQQL NLIVEKVKAI ADKGKRVTDS
DLYAIGEGVL GIEEGPKAMD LADIAIMTGN HMIPTASVRA IWQGEERVVS CVGNGPVDAA
LNAIGTFLPA EVRLKDFRIE AISGGSDAIC HVTIAVEDQK GRIVDAGASG DDIVLTSTEA
MVNAINLLYR L