Gene Mpal_2063 details

Gene Information

• Locus tag: Mpal_2063
• Symbol: tmk
• ID: 7272044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosphaerula palustris E1-9c
• Kingdom: Archaea
• Replicon accession: NC_011832
• Strand: +
• Start bp: 2177844
• End bp: 2178473
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643570675
• Product: thymidylate kinase
• Protein accession: YP_002467085
• Protein GI: 219852653
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.615627
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCCTGA TCACCATCGA AGGGATCGAT GGCGCAGGAA AGAGTTCGCT GGTCCGCCGG 
CTGAAACATT CGCTCGCCGA CCTGGACCCG ATCTTCACCC GGGAACCGGG GTCGACCTGG 
ATCGGGGAGT CGGTCAGGCG CGGGATCGCC GAGGAGATCG ATCCGGTGGC AGAGGCGCTC 
CTCTTTGCAG CTGACCATGC GGCTCACATC GCCCGGGTGA TCAGACCGGG GCTCGCGAAG 
AACAGGGTGA TCATCTCCGA CCGCTACGTC GACAGCCGGT ACGCCTACCA GTCGGTGATG 
CTGAAGGGGG TGCTCCCCGA CCCCGGCACC TGGCTCCGTC AGGTGCACCA GCACTGGTCG 
ATCGCCCCGG ACCTGACCTT TCTGATGGTG CTGCCGGTCG GCACGGCCCT CGCCCGGATC 
ACCAGGGGAC GGCCGAAAAA AGAGCATTTT GAGCAGACCG CCGTGCTCGA AGCCGTGCAG 
CAGCAGTACC TGGCCCTCGC CAGGGCCGAA CCATCACGGT TCGTGGTGAT CGATGCAGAA 
CTGGATCTGG CCGAGGTCCA TCATTTCATG GACCAGACCA TCCGGGAAGC GGTCAGGCGG 
AACGCTGGAT CGTCACGATC ACATCCCTGA 

 

Protein sequence

MVLITIEGID GAGKSSLVRR LKHSLADLDP IFTREPGSTW IGESVRRGIA EEIDPVAEAL 
LFAADHAAHI ARVIRPGLAK NRVIISDRYV DSRYAYQSVM LKGVLPDPGT WLRQVHQHWS 
IAPDLTFLMV LPVGTALARI TRGRPKKEHF EQTAVLEAVQ QQYLALARAE PSRFVVIDAE 
LDLAEVHHFM DQTIREAVRR NAGSSRSHP