| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2044 |
|---|
| Symbol | |
|---|
| ID | 7272025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2164516 |
|---|
| End bp | 2165031 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643570656 |
|---|
| Product | protein of unknown function DUF1016 |
|---|
| Protein accession | YP_002467066 |
|---|
| Protein GI | 219852634 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4804] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA CCGCACTCCC ATCTTCTACT GCCGAGAGTC ACGATTATCA AAGCCTCCTC
GCCGATCTCA AAACCCGGGT CCGCTCAGCC CAGGTCAAGG CCGCACTCTC GGTCAACCAC
GAACTGATCC AGCTCTACTG GGAGATCGGC CGATCGATCC TCGCCGCCCA GGACCGGGAA
GGGTGGGGGA CGAAGGTGAT CGACCGGCTG GCCGGCGATC TCCGCCATGA GTTCCCGGAG
ATGAAGGGGT TCTCGCCCCG GAATCTGAAA TATATGCGCC GGCTCGCCGA GGCCTGGCCC
GACCCCTCAA TTGTGCCACA GCCAGTGGCA CAAATTCCGT GGGGCCACAA CTGCATCCTG
CTCGATAAGA TTGGCGAGCC GGCACTGCGT GAATACTATA GTCGAAAACC TGATAATAAT
CAGGTTTTCT CGAAATCCGG TTCTCCCGTA AGGGAGAAAC GGATCGCTGA GAGAAGGGAA
CTCGTAGTAA AACAAAAAGA AAAGACGGGG TTCTGA
|
|---|
| Protein sequence | MEKTALPSST AESHDYQSLL ADLKTRVRSA QVKAALSVNH ELIQLYWEIG RSILAAQDRE
GWGTKVIDRL AGDLRHEFPE MKGFSPRNLK YMRRLAEAWP DPSIVPQPVA QIPWGHNCIL
LDKIGEPALR EYYSRKPDNN QVFSKSGSPV REKRIAERRE LVVKQKEKTG F
|
|---|
| |