| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2018 |
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| Symbol | |
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| ID | 7271999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2140030 |
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| End bp | 2140971 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570632 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002467042 |
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| Protein GI | 219852610 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.250586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCA GTGTGGTGAC AGGCGGGGCC GGATTTATCG GATCCCACAT TGTGGATGCA
CTGGTGGCGC AGGGTGACCG CGTGCTGGTG ATCGATGATC TGAGTACAGG GGACCGGACG
AACCTGGCGG CGGCCGAGCG GTCCGGACAG GTTGAGATCC TTACAGCCGA CCTGCTCGCG
GACGGATGGC AGCAGACGAT CGCCGGGGCC GACCGGGTCT TCCACATCGC CGCAGACCCC
GATGTTCGGG GCGGGGCATC CTCACCTGAC GCAATGTTCC GGTACAGTGT CGTGATGACC
GAGCGGGTGC TCGAGGCGAT GCGGGAGCAG CATGTCAGCA ACCTGATCTT CACCTCCACC
TCCACCGTCT ACGGCGAGGC GACCGTGATC CCGACCCCGG AGTCGTACAC CCCGATGGAA
CCGATATCGG TCTATGGTGC AGGGAAACTC GCCTCTGAAG CGATCATCTC GGCCTACTGC
CACTCGTTTC AGATGAAGGC CTGGGTCTTC CGGTTCGCCA ACGTCATCGG GGCCCGCTCC
AACCACGGGA TCCTCTGGGA CTTCATGCAC AAGTTGAAGC AGAACCCGAC AGACCTTGAG
ATCCTTGGGG ACGGGACCCA GACCAAGTCA TACATCGAGG TGCACGCCTG TGTCGAGGCG
ATCCTCTATG TCCTCGCCCA TACAGACCAG ACCGTCAACA CCTACAACAT CGGTTCAGAG
GACTGGATCG ATGTGACCGG GATCGCCGAC CTGGTCGTGG CGGCGATGGA GCTCCCCGGG
GTCACCTACC ACTACACCGG CGGCAAGCGG GGATGGGTGG GAGATGTTCC GAAGATGCAG
CTCGCCGTCG ACCGGCTGAA GACACTCGGC TGGACGCCGA CGATCAACTC ACGGGAGAGT
ATGGAGGTCG CGATGCAGGC GATGCTGGAG GACCAGGCGT GA
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| Protein sequence | MMFSVVTGGA GFIGSHIVDA LVAQGDRVLV IDDLSTGDRT NLAAAERSGQ VEILTADLLA
DGWQQTIAGA DRVFHIAADP DVRGGASSPD AMFRYSVVMT ERVLEAMREQ HVSNLIFTST
STVYGEATVI PTPESYTPME PISVYGAGKL ASEAIISAYC HSFQMKAWVF RFANVIGARS
NHGILWDFMH KLKQNPTDLE ILGDGTQTKS YIEVHACVEA ILYVLAHTDQ TVNTYNIGSE
DWIDVTGIAD LVVAAMELPG VTYHYTGGKR GWVGDVPKMQ LAVDRLKTLG WTPTINSRES
MEVAMQAMLE DQA
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