Gene Mpal_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1988 
Symbol 
ID7270794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2113416 
End bp2113700 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content59% 
IMG OID643570603 
ProductChorismate mutase 
Protein accessionYP_002467014 
Protein GI219852582 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.319337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA CTGTTCTTCG CGAGGAGATC ACCAGTGTCG ACGATCAGAT CATCCGCCTG 
ATCGGAACCA GGCAGCAGAT CGCCGGCAGG ATCGCACGAG TCAAGTACTC CAAGGAGGCT
CCGATCAGGG ACGAGGGACG GCGGCAGGAA GTGCTCGAGC ATGCCTTCAA CCGAGCCGTC
GAGGAGAAGA TCGATCCCAG AAGCGTCCGG CAGATCTTTG AAATCCTGAT CGAGATGAGC
GAGGAGCGTC AGCACGAATG CATCGGGGAG GGGGACCTCC CCTGA
 
Protein sequence
MDITVLREEI TSVDDQIIRL IGTRQQIAGR IARVKYSKEA PIRDEGRRQE VLEHAFNRAV 
EEKIDPRSVR QIFEILIEMS EERQHECIGE GDLP