| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1986 |
|---|
| Symbol | |
|---|
| ID | 7270792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2112191 |
|---|
| End bp | 2112499 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643570601 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_002467012 |
|---|
| Protein GI | 219852580 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1777] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.334038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC CAAATTCCAT TCCCGAACTG GCAAAACTTC TGGGTTTTTT GGGAAATGAA
CAGCGACTCA ACATTCTCAA AGCGATCTCC CACGAAGAAA AGTTTGCGAG GGAGATATCC
GAAGAGATCG GGGTCTCCCG GCCTCTTGTG AACATATATT TAAAACAGTT TGAAAAGGCC
GGCCTTGTTG TTGGTACCAA TCGCGTTGCA CAGGAACCAC CGTACCTCAA ACGATATTAC
AGGGCAGTGC CCTTCGAACT GGTACTAAAT CTGGATCTCA TAGAGAAACT GGAAGGGGGA
GGAAGATGA
|
|---|
| Protein sequence | MFEPNSIPEL AKLLGFLGNE QRLNILKAIS HEEKFAREIS EEIGVSRPLV NIYLKQFEKA
GLVVGTNRVA QEPPYLKRYY RAVPFELVLN LDLIEKLEGG GR
|
|---|
| |