| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1978 |
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| Symbol | |
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| ID | 7270784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2104873 |
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| End bp | 2107344 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570593 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002467004 |
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| Protein GI | 219852572 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.410685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC TTATGAAAAG AATGACCTGG CTGCTGATCG TGCTGACTCT CATCTCCTGT
CTGTTGCTGA TCGCGCCGGT GTCGGCTGGT CCGGCCGCCA CGACAAACCT GACAGGTACC
GTTGTCGATC AATTCACTGG TCTTCCCATA CCCGGTGTTG AGATCGATAC TAAGGAAGGT
ACTGCCTATT CCCTGGCTGA TGGGAGTTTC AGCCTCCCGA ACACCATCGT TGGATTTGAT
GATGGTCAGT ATTTTGTGAA ACTGGATTTC CAGGATGAAA ACTGTTATGA TGAATACCGC
ACCACCGTCA ACGTCACCGA GGCTGAAGTG TATCATTCTA AAGACCTGGG GACCATCAAA
CTCACCCCCG GGGTGGCGGG TTACGTATAC AATTCAGTCA CCCATCAGCC GGTGTCGGAC
GTCCAACTCA CCCTAACCGA TCCTTCGTCG GGAGATTTTC TCATCAGCTC GACGACATCG
AAAAATACGG GATACTATAT ATTTCCCCTT AATCTGAACG AGCAGGGTCT CAATCACTTT
AATGGAAGTA CTATCTCCTA TGGCTATATT CCCCCTAATT ATACCCTGAC TGCAGTCAAG
AATGGATATC AGTCATACTC CAATTCAGAA ATCAGGATAA CTTATAAAGG TTCAGATGAT
GGAGTTCCTC ATAACATCCA GCTCGTCCCG ATATTCACCG CCGGCTTCTA CGCCTTCGGG
CATGTCGGCC AGGCCCCGTA CTCGGTCAGG TTCCTGGACC AGACCGTTGG CTCGCCGACC
GCCTGGAAAT GGGACTTTGG TGACGGCACC ACCTCCACCG AGCAGAACCC GACCCATATC
TACAACCAGA CCGGCGCCTA CAACGTGGTC CTGACTGCTT CGAATGACGA GACGAGCGAC
ACCTGCACCC AGTACCGGTG CGTCATCGTC AACACCGTGC CGACAGCGAA TTTCACGGCC
AACGTGACCT CCGGCCCGAC GCCACTCACC GCGCAGTTCA CTGACGAATC CTCTACTGCG
AGCGGATACC AGTGGCAGTT CGGTGACGGT GCGACCTCGA CCGATCAGAA CCCGGTCCAT
ACCTATACAC AGCCGGGTTC CTACACGGTG ACCCTGGTCA TCTCCAGTGC AGACTACGGC
AGTGTCTACA CGCAGAAGAC CGGGTACATC ACGGTGAGCG ACCCGCCGAT GGTCGGGTTC
ACGGCAAATG TAACGGCCGG CCTTGCTCCG CTCGGCGTGC AGTTCAATGA ATCGATCAAC
GGCTCGGTCC AGTATTATTA CTGGCAGTTC GGCGACGGGG GAACCTCGTT CGATCAGAAC
CCCGTTCATC GCTATGATAC GGCCGGCAGG TACACTGTCT CCCTCTACGC AATTGGTTCG
AACGGAACCC AGGTGAAGAC GGTCGATGAC TACATCAACG TCACCGCCCC GGTGACGCCA
ACCCCGACGG TGACCGTGAC TTCAACGGTA ACACCTGCAC CGACCGCAAC CGGATACCCG
CCAGTGGCCA ACTTCACGGT CACCCCCCAG GGTGGAGCCG GCTCAATGGG CATCCTGGTG
ACCGACACCT CCGTGAACGC GACCTCGGTT CGGTACGACC TCGGTGATGG CACGACCACC
GCCTATCGGA ACTTCCAGTT CACCTACTGG CAGGCTGGCA CGTATACGAT CAAACAGACC
GCGACCAATG CCGCTGGATC TTCAAATAAG ACCATATCGG TGACAGTACC GACGGTGCCG
GTCACAACCA CCCCGACCTC GGAGGGTGGG GATCAGGGAT GGTATACGAT CCACTGTAAT
GTGGATGGAG CCACAGTCCT CTTCGATCAG ACCACCAAGG GGACGATCGC ACAGGGGATT
CTGAAGATAC AGGTCTATAC CACCGGAACT CCCTACAGAA CCTACACGGT CCAGAAAGAT
GGATACACCA CCGTCTCCGG AACCATCACC GACCATCCTG GTAAAGACCA GAACGTGGAT
ATAACCGTGA ACCTGACCCC GACCGGTCAG GCATACAACG GCCCGCACAA CCTCCCCGGC
ACCCTGCAGG CCGAGGACTA CGACCTCGGC GGTGAGGGTG TCGCCTACCA TGACACAACC
CCTGGGAACG AGGGTGGGGT CTACCGGCAT GACGACGTCG ATATCGAACA GCTCGACACC
GACGGGTCGC CGAACGTGGG CTGGATCCGT GCCGGCGAAT GGCTTGCGTA CACGGTGAAC
GTCAGCACTG CCGGCACGTA TGATGCTGGG TTCAGGGTTG CCTCCTCCCA TGCAGGTTCA
ACAGTCCAGG TGTATGTCGA TGGAGGGACC ACACCTGTGG CAACCGTGAC TGTCCCGAAT
ACCGGTGACT GGCCTGTCTT CCAGACGGTC TCGGCACAAG TGACGCTGCC GGCCGGCCAG
CACCGGCTGA GACTTGTATT CCCGACCGAC TATGTCAACA TCAACTGGAT CACCTTCGCC
CTGAGGGGCT GA
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| Protein sequence | MMTLMKRMTW LLIVLTLISC LLLIAPVSAG PAATTNLTGT VVDQFTGLPI PGVEIDTKEG
TAYSLADGSF SLPNTIVGFD DGQYFVKLDF QDENCYDEYR TTVNVTEAEV YHSKDLGTIK
LTPGVAGYVY NSVTHQPVSD VQLTLTDPSS GDFLISSTTS KNTGYYIFPL NLNEQGLNHF
NGSTISYGYI PPNYTLTAVK NGYQSYSNSE IRITYKGSDD GVPHNIQLVP IFTAGFYAFG
HVGQAPYSVR FLDQTVGSPT AWKWDFGDGT TSTEQNPTHI YNQTGAYNVV LTASNDETSD
TCTQYRCVIV NTVPTANFTA NVTSGPTPLT AQFTDESSTA SGYQWQFGDG ATSTDQNPVH
TYTQPGSYTV TLVISSADYG SVYTQKTGYI TVSDPPMVGF TANVTAGLAP LGVQFNESIN
GSVQYYYWQF GDGGTSFDQN PVHRYDTAGR YTVSLYAIGS NGTQVKTVDD YINVTAPVTP
TPTVTVTSTV TPAPTATGYP PVANFTVTPQ GGAGSMGILV TDTSVNATSV RYDLGDGTTT
AYRNFQFTYW QAGTYTIKQT ATNAAGSSNK TISVTVPTVP VTTTPTSEGG DQGWYTIHCN
VDGATVLFDQ TTKGTIAQGI LKIQVYTTGT PYRTYTVQKD GYTTVSGTIT DHPGKDQNVD
ITVNLTPTGQ AYNGPHNLPG TLQAEDYDLG GEGVAYHDTT PGNEGGVYRH DDVDIEQLDT
DGSPNVGWIR AGEWLAYTVN VSTAGTYDAG FRVASSHAGS TVQVYVDGGT TPVATVTVPN
TGDWPVFQTV SAQVTLPAGQ HRLRLVFPTD YVNINWITFA LRG
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