| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1970 |
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| Symbol | |
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| ID | 7270776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2091937 |
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| End bp | 2097732 |
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| Gene Length | 5796 bp |
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| Protein Length | 1931 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570585 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_002466996 |
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| Protein GI | 219852564 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat
[COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.21259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAG GAGCCGTGCT TTTCTTCCTA CTTGTGCTGG TCAGCATCAT CGTCACCCCG
GTATCGGGTG TGGATGTGAC CGGTCCGATG ACCATCTCAT CGCCGGGCAC TTACCAGTTG
ACCACCGACC TGACCTCAGG AGACGCCTCG ATCTCCATCA CCTCCTCTGA CGTGGTGCTG
GAGGGGAACG GTCATTCCAT CGAGGGAGCA GGCTCTGATG CAGGTACTGC CGGGGTCTAT
GTCTACAGTG CCGGAGGACT CCTCTCGAAC GTGGTCGTCA GGAACCTGAA GGTCAGCAAC
CACCAGTACG GGATCTATTT TGTCGGCGCC CAGAACGGAA AGATCGAGGG GTGCACGGTC
GATGGAAACG CCTTCGGGAT CGGCTGCAAC CAGGATGCGA ACGGGAATAC CATCACCAGC
AACACCATCA CCGGCAACAC CTACGGGCTG GCGATTACCT CTTCGAGCGC CAACAGCGTC
AGCGATAATA CGGTGACCGG GAACAGCGCG ACCGGGGTAT ATCTCTACTC GACCAGTGGA
AACACGATCA CCAACAACAA CTTCAACAAT ATAAAGAATG TCGATTTCAA GGGGTCGGTG
CTGAGCAACA CCTGGAGCAC TGCGATCACT GCCGGGAGTA ACATCATCGG CGGACAGAAC
CGGGGGGGAA ACTTCTGGGG GAGCCCTGAT GGGAACGGGT TCTCACAGAA GACGGCGGAC
GCCAACAGTG ACGGGATCGC AGATCAGGCC CTGACACTTG CCTCCAACAA CATCGACCAG
TACCCCCTCG CCTCCTCGAC AGCCCCGACA TCGACAACCA CCGGTACAAC CACTTCCACC
ATCTCCCCCA CAATCACACC AACGGTGACG GCCACCACCG CAACCATGAC GACAGTGACG
CTGACACCGA CCGCTACAGT GACAGGGAAC GAGATCCCGG TCACCGGGCC GATGGTGATC
TCGTCCCCGG GGGTCTACGG ACTGACGCAG GATATCGCCA CGTCCGTCTC CGGCAATGCT
GCGATCACGA TCACCTCCAG CGATGTGATC CTGCATGGAA ACGGCCATAC GATGAGTAAT
GGGGTCGGAG GAGATACCTG GGGTCTGATC GTCATGAACG ACAATCAGAC GCTCTCCAAT
GTGACCGTTA CCGACCTGAC CGTCACGGCG TACAAGTACG GGGTCAGCCT GTATATCGTC
CAGGCGAGCA GGATCACCGG CTGTCATATC ACCGGCAGCA CGGGAGTCGG TCTCGGCATC
GCCGCATCGC AGTCCAACCA GTTCGTCAAC AATTACTTCA ACAACACCAT CAACATCGTG
AACTATGACC CGGAACCGAA GACCAACACC TGGAACACCC CGATCACAGC AGGTATCAAC
ATCATCGGTG GGCCGAACCT GGGCGGCAAC TTCTGGGGGG ACCCGGACGG TAAAGGTTTC
TCAGACCTGA ACTCAGACAC CAACGGAAAC GGGATCTGCA GCGCCTCCTA CAAGATAGAT
TCCCAGAACG AAGACCAGTT CCCGCTGACA AAGAATGTCG GAAGCGGTCA GCCCACCCCG
ACCCCGGTGA CGACAGTGAC GACGGGGACC ACCACGATCA CACCGACCTC CACAGTGCCG
GTGCCGACCC ATACCTCCGA GACGACAGTC ACCACACTCT CAACAGTACC GACCGGGGTT
CCCGGGACAA CTATAACCAC CACACCCACG ACTGGCCCCA CCATCATCAC CACTACTACT
ACCACCACAC CCCTGAACAG TACGATTGTC ATCAGCGACC TCAACCTCGT TGGCGAATGG
GTCAATATCA CCAACAAAGG GTCGATTCCA GTCTCGCTTG AGAACTGGAA GATCCAGGAT
ACTACAAAAC AGAACCTGAA ACTCCACACC TTCACCTTTG GGATCTTCAC CCTTGCACCC
GGTGCAACGG TCACCGTGCA TACATTCAAT GGAACAAATT CATCCACTGA TCTCTATTGG
GGTCTCAATG AAGAGGTCTG GAACAATGAT GGCGACACAG CCTCTCTGTA TGACAGTGCA
GGTAATCTGA TCAGTACATT CCCCCCAGCC ACTCCCAGTG GAAACGTCAC GCCAACCGTC
ACCCCGCTGT TGCCGGAGAC GATCGTCCCG ACGATCACTG CAGTACCGCC GCCGCCGGCT
GACGCGATCC CGGTGACCGG ACCGATCGTC ATCACCAAGC CCGGCTACTA CCTGCTGATG
AACGACATCC AGCACACCGA CGAGGTGGTC TGTATCGATA TCCGGTGCTC GGATGTGACC
TTCAACGGAA ACGGCCACAC GATCAGCGGC AGGAATGTCT TCAACACCTA CGGTGTCTCG
GTGTACCAGC CGTCGACCCG GTTGGAACGG GTGGTCATCA CCAACCTGGC GACCGCCGAC
TGGTTCTACG GGGTCTCGTT CTGGGACACC CACGACGGGC GGATCAACAC GGTCACGACC
ACCCGGGACC AGTACGGCAT CATCCTCCAG TCCTCAACCG GAGACCTGAT CGACAGCAAC
ACCGCCCAGA GGAACACCCA GGGAGGGATC CTGCTCCTCG CCGGCAGTGA CGAAAACATG
ATCTTCAAAA ACGTCGCAGA CGCCGACACC TGGGGGTTCT ACCTCTCATC TGCAAAGAAG
AACACCGTCC TCTCCAACTA CGCCACCGCC AACAAACAGA ACGGGATCGG CCTGTACAGC
GCCGGCAACA ACACGATCGT CAACAACTTC CTCAACAACA CCCAGAACGT CGAGTTCCAG
AGCACAACCC TGTCGAACAA CTGGTCGGTC AACCTCTCGC TCGGCACCAA TATCATCGGT
GGCGTCCTCT TCGGCGGCAA CTACTGGGCG GCGCCGACCG GGACCGGGTA CTCGGAGACT
GCAGTCGATG CGGACGTGAA CGGTATCTGT GACCAGCCCT ATACCATCGG TACCGGCAAT
GTGGATCAGA ATCCACTGCA CGCCACCGGC AGAAACCCGT TCGCCGCGAT CCCGGTCAAC
AACTCGACCG TGATCACGGA ACCAGGGACC TATGTCCTTC AGAACGATAT CACCGGAAGC
GAGGTCCCGG TCTGCATCGA CATCAGGTGC TCTGATGTGA TCTTCGACGG AATGGGCCAT
ACGATCAGCG GCCTTGGTAC CTTCAACACC TACGGTGTCT CGGTGTACAA CGCATCCAAA
CAGCTCGAAC GGGTGACCGT GAAGAACCTG ACCGCCACCC AGTGGGGGTA CGGGATCTCA
TACATGAACA CCCAGCAGGG GACGATCGAT CACTGCACCC TGACCGACAA CCATTACGGG
GTCGTCCTCA CCACCTCGAG CACCACGATG CTCCGGGACC TGACGGCCAT ATCCAACCTT
CAGGGCGGTA TCCTCTTCCT TGCGGACAGT AAAGCCAACA CCCTCTACAA CTGCACCGCC
GAGAGCAACC AGTGGGGGGT CTTCCTCTCC TCTGCCAGCG ACAGCCTGCT CTTCAACAAC
CATATCATCA ACAATAACCT GTCAGGACTG AGCCTGATCG CCGCCAACGA CAACACGATC
GTCAACAACT ACTTCAGCAA CGTCAACAAC ACCGACTTTG AAGACAAGAT GGGCGCAAAC
GTCTGGAACA TGTCGCTGAC ACCAGGGAAC AACATCGCCG GCGGCCCCCT CTATGGCGGC
AACTACTGGG GCGGCCCCAA CCAGACCGGC TTCTCAGATC TCACCCCTGA CGACAACAAC
GACGGGATCT GCGACCAGCC GTACCACCTG ACCGCGACGA ACGTCGACCT GTACCCCCTG
CGGAATGTCT CCCCTCTCGG TCTCTACTAC CCGATCACCG GACCGACCGT CATCACACGA
CCAGGACGAT ACCTGGTGAT GCAGGACTTT TCGGCATCGG ACGCTCAGGT CGGTATCGAT
ATCAGGTCCT CTGATGTGAT CGTCGATGGC ATGGGTCACA CCATCACCGG CGCCAAGAAG
TTCAACTCCA ATGGTCTCTC GGTCTACAAC GACTCGGTCC AGCTCTCGAA CATCACCATC
TCCAACCTCT CCATGGGAAG CTGGTTCATC GGTGCGAACT ATCTGAACAC CCGGGACTGC
AGGACCGATA ATGTGACCAC CGTCGGGAAC GACTACGGGA TCGTGCTCTC CATCGGAGAA
CGAATGCTCG TGAACCATAC CGACGTATCC GCCAACACCT ATGACGGCCT CTCGCTCTCC
TCTGTGGTGA ATTCACAGCT CATCGATATC ACCGCAGACA GTAGTGGGTA TGGCATCTGG
TCGTCGGGGT CATCAGGGAA CACCTATGTG AACTGTTCGG CCAGTAATAA CCAGCAGGGG
ATACAGATCC AGAACTCAAA GAGCAACCTC TTCCAGAACA CCACGGCAGA GAGCAACACG
GTCGGCCTGA GTCTGCTCGA TCAGAGTTCG TTCAACCAGG TCGAGGCCGG TTCGTTCAGC
AAAAATGGCA GGGGGATTGT CATCAACAGT TCAGGAAACG CCACCATCTC CAACGTGACG
GCCTCGAACT GTACAGCAGG GAGTGGGATT ACCATCACCG ACTCAGCCGG TTCGGTGTTG
ACCAGTAACC TGGCAGACCA TAATACCAAC GGTATCTCGC TGCAGAACTC CGACAACGGC
GTGATTCACG CCAACCAGGT GACCAACAAC ACCAACAACG GAATATTGCT GAACGATGCG
GCAGCGACGT TCATCTCCGA GAACAGTGCC ACACTGAACG GAGACTCGGG ACTCCTGCTG
ACCGGTTCCA GCAAAAACAG GATCGGGCAG AACACCCTCA CCAGCAATGC TGTCGGGTTC
CGGGCAGAGG GCTCATCAGA TAACTCTCTG GTCGAGAACC TGATCACCAC GAACGGTTAC
GCCGGGGTGA GTCTCGCCCA GTCCAGCAAC AGGAATACAA TCTTCCACAA CACCGTCAGG
GAGAATGACA AGGGTATCGT TATCGCAGAC TCTGAGATGA ACGTGATCAC CGACAATATC
TTCTCAAACC AGGTAAATGC GCTTCTCGCC GGAAACCCCG GAATGAACGC CTGGAATATC
TCGGAGGAGA CCGGCCCCAA CATTGCAGGC GGGCCATACC AGGGCGGGAA CTTCTGGACA
AGCCCCGGTA AAAAGGGCTT CTCTGATGTG GCCGTCGACA ATGACCATGA TGGCTTCTCC
GACCAGCCAC TGACGATCGG AGCGAATAAT GTCGACCAGC TCCCGCTCCT GATCTATGCC
CAGGTCCAGA CCCCGGTGCT CCCGACGACC TCGTTCACCG TCGACAAAAC CAGCGGGGCC
GCCCCGATGC AGATCCAGTT CACCGACACC TCGATCGGGA ACCCGAGCCA GTGGCTCTGG
GACTTCGGGG ACGGCACCAC CTCTTCAGAG CAGAACCCGT CACACATGTA CTCCTGGGCA
GGGATCTTCA CGGTCAAACT GACCACCACC ACCGCCGCCG GCTCGACCAG TACGATCCAG
CGGAAGATGA TCACGATCAC CACCGACCAG GCGATGAGAC CGGTCGCGAA CTTCATCGCA
TCGTCGACGG ACGGGACCTC CCCGATGAAT GTCCAGTTCA CCGACACCTC GATCGGACAT
CCGGATCACT GGATCTGGAC CTTCGGCGAC GGTTCCACCG ATACCGTGCA GAACCCGTCG
CACACCTACA AAACAGATGG CACCTACGCG GTGACCATGC AGGTCTCCAA CCAGTACGGC
ACCGATACCG AGACAAAGGA CGGGTTCATC ACCGTCAGAC AGTATGTCCG CACCGAACGA
AACGGGGCAC TGGTGCAGCC GGTTGTGCAG CCGTAA
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| Protein sequence | MTKGAVLFFL LVLVSIIVTP VSGVDVTGPM TISSPGTYQL TTDLTSGDAS ISITSSDVVL
EGNGHSIEGA GSDAGTAGVY VYSAGGLLSN VVVRNLKVSN HQYGIYFVGA QNGKIEGCTV
DGNAFGIGCN QDANGNTITS NTITGNTYGL AITSSSANSV SDNTVTGNSA TGVYLYSTSG
NTITNNNFNN IKNVDFKGSV LSNTWSTAIT AGSNIIGGQN RGGNFWGSPD GNGFSQKTAD
ANSDGIADQA LTLASNNIDQ YPLASSTAPT STTTGTTTST ISPTITPTVT ATTATMTTVT
LTPTATVTGN EIPVTGPMVI SSPGVYGLTQ DIATSVSGNA AITITSSDVI LHGNGHTMSN
GVGGDTWGLI VMNDNQTLSN VTVTDLTVTA YKYGVSLYIV QASRITGCHI TGSTGVGLGI
AASQSNQFVN NYFNNTINIV NYDPEPKTNT WNTPITAGIN IIGGPNLGGN FWGDPDGKGF
SDLNSDTNGN GICSASYKID SQNEDQFPLT KNVGSGQPTP TPVTTVTTGT TTITPTSTVP
VPTHTSETTV TTLSTVPTGV PGTTITTTPT TGPTIITTTT TTTPLNSTIV ISDLNLVGEW
VNITNKGSIP VSLENWKIQD TTKQNLKLHT FTFGIFTLAP GATVTVHTFN GTNSSTDLYW
GLNEEVWNND GDTASLYDSA GNLISTFPPA TPSGNVTPTV TPLLPETIVP TITAVPPPPA
DAIPVTGPIV ITKPGYYLLM NDIQHTDEVV CIDIRCSDVT FNGNGHTISG RNVFNTYGVS
VYQPSTRLER VVITNLATAD WFYGVSFWDT HDGRINTVTT TRDQYGIILQ SSTGDLIDSN
TAQRNTQGGI LLLAGSDENM IFKNVADADT WGFYLSSAKK NTVLSNYATA NKQNGIGLYS
AGNNTIVNNF LNNTQNVEFQ STTLSNNWSV NLSLGTNIIG GVLFGGNYWA APTGTGYSET
AVDADVNGIC DQPYTIGTGN VDQNPLHATG RNPFAAIPVN NSTVITEPGT YVLQNDITGS
EVPVCIDIRC SDVIFDGMGH TISGLGTFNT YGVSVYNASK QLERVTVKNL TATQWGYGIS
YMNTQQGTID HCTLTDNHYG VVLTTSSTTM LRDLTAISNL QGGILFLADS KANTLYNCTA
ESNQWGVFLS SASDSLLFNN HIINNNLSGL SLIAANDNTI VNNYFSNVNN TDFEDKMGAN
VWNMSLTPGN NIAGGPLYGG NYWGGPNQTG FSDLTPDDNN DGICDQPYHL TATNVDLYPL
RNVSPLGLYY PITGPTVITR PGRYLVMQDF SASDAQVGID IRSSDVIVDG MGHTITGAKK
FNSNGLSVYN DSVQLSNITI SNLSMGSWFI GANYLNTRDC RTDNVTTVGN DYGIVLSIGE
RMLVNHTDVS ANTYDGLSLS SVVNSQLIDI TADSSGYGIW SSGSSGNTYV NCSASNNQQG
IQIQNSKSNL FQNTTAESNT VGLSLLDQSS FNQVEAGSFS KNGRGIVINS SGNATISNVT
ASNCTAGSGI TITDSAGSVL TSNLADHNTN GISLQNSDNG VIHANQVTNN TNNGILLNDA
AATFISENSA TLNGDSGLLL TGSSKNRIGQ NTLTSNAVGF RAEGSSDNSL VENLITTNGY
AGVSLAQSSN RNTIFHNTVR ENDKGIVIAD SEMNVITDNI FSNQVNALLA GNPGMNAWNI
SEETGPNIAG GPYQGGNFWT SPGKKGFSDV AVDNDHDGFS DQPLTIGANN VDQLPLLIYA
QVQTPVLPTT SFTVDKTSGA APMQIQFTDT SIGNPSQWLW DFGDGTTSSE QNPSHMYSWA
GIFTVKLTTT TAAGSTSTIQ RKMITITTDQ AMRPVANFIA SSTDGTSPMN VQFTDTSIGH
PDHWIWTFGD GSTDTVQNPS HTYKTDGTYA VTMQVSNQYG TDTETKDGFI TVRQYVRTER
NGALVQPVVQ P
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