| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1903 |
|---|
| Symbol | |
|---|
| ID | 7272720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2015437 |
|---|
| End bp | 2016234 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643570518 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002466931 |
|---|
| Protein GI | 219852499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2768] Uncharacterized Fe-S center protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCA TCATCTATTA TTTTACCGGC ACCGGCAACT CTCTTGCCGC TGCAAAAGAG
ATCGGCGCAG CACTTGGTGA CTGCGAACTG GTCCCAATTG CATCGTACAG GGACACAACA
GGGGATATTA TCCCAGGTGT TGACCGGGTC GGAATAGTAA GCCCGGTTTA CTTTACCGGC
CTTCCGGTGA TGGTAGCCGA ATTTGCTGAA CGCCTCGATC GCTCGCAGGC ACAGTACGTC
TTCTCTGTGG TCACGTTCGG AGGTTCCGGC GGACCGTCGA CATTGCACCA GCTCGATAGC
ATCCTGAAAA AAAGGCAGGA CAGGGGTCTG GATGCTGGGT TCATGGTAAA AATGCCCGGC
AATTATATCC TGATGTACGG TTCCCCTATC GGAAAAAAGC GGGAGAAACT TCTCGCTATG
GCTGATGAAC AGATCGCGGC AATTACAGCG ATGATCAATC GCTGTGAACC GAGGAGATTA
CCCTCTTCCC TCCTCTTCAG CATCCTTCAC ACCCTCATGT ACCCGCGTTT CACAGCACAT
GTCCACGATG ATGACCGAAA ATTCTCTGTC AATGAGCACT GCACATCATG CGGAACCTGT
GCAGCCATCT GCCCGGCTGA AAACATCGAG ATGGTGGACA AAAAACCCGT CTGGAAACAC
CACTGCGAAC TCTGCTGCGG GTGTATCCAC CTCTGCCCGG CAGGAGCGAT CCAGGCTGGC
TCCCGTACCG CTACCCGGCA GCGGTACCGT AACCCTTCGA TCAGCATAGA GGAACTCAAG
GGACAAAAGG AAACATGA
|
|---|
| Protein sequence | MKTIIYYFTG TGNSLAAAKE IGAALGDCEL VPIASYRDTT GDIIPGVDRV GIVSPVYFTG
LPVMVAEFAE RLDRSQAQYV FSVVTFGGSG GPSTLHQLDS ILKKRQDRGL DAGFMVKMPG
NYILMYGSPI GKKREKLLAM ADEQIAAITA MINRCEPRRL PSSLLFSILH TLMYPRFTAH
VHDDDRKFSV NEHCTSCGTC AAICPAENIE MVDKKPVWKH HCELCCGCIH LCPAGAIQAG
SRTATRQRYR NPSISIEELK GQKET
|
|---|
| |