| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1838 |
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| Symbol | |
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| ID | 7270384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1953338 |
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| End bp | 1956445 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570453 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002466867 |
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| Protein GI | 219852435 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.533489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.441295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA ATATGCAATT GAGAAACGTG ATGGCGCTTG CCATCCTCCT GGTACTGTCA
TCCGCACTGC TGGTACTTCC AGCAACCGCG GCAAGTATCC CTGTCAACGG TCCGGTGGTC
ATCACCGAGC CCGGCACCTA TGTGCTCACA CAGGATATCA CCAGCAGCAG CCAGATCGTA
TGTATAGAGA TCAAGGCCTC CAACGTCGTC TTCGACGGTC AGGGCCATCA GATCAGTGGT
GTGAACAATG AGGGATCAGC CGGTATCTTC GTTTCGAAGG ATGCCAGCAC CCCGGTCACC
GGGGTCACCA TCAAGAATGT TCGTCTGAAC AACTGGTTCT ATGGGGTCTA TCTCCTGAAT
GCACAGAACA GTGCAATCCA GGATGTCACC ACGACCGGGA ATGCCAACGC AGGGATGGTG
CTCTACTCTG GAAGCACAGG GAATACCATC TCCGGCAGCA CGCTCACCGG CAACGGACGT
GGTATCATCC TCTCCACCTC CAGTGGTTCG AACACCATCA GCGGCAACAC CCTCACCGGC
AACAGTAATC AGGGTATCTA CATCTTTGAT TCGAACGGCA ACACGGTGAA CGGGAACACC
ATCACCAATA ACACCAATGC AGGGCTGTTC ATCTACAGCG CCTCGGCAAA CTCAGTATAT
AACAACAACT TCAGCAACCT CTACAATGCT CTCTTCGGGG GAACCATTGG CTCCAACTCG
TGGAACACCA ACCAGGCCAC CGGCACCAAC ATCGTGGGCG GTCCTTCGAT CGGCGGTAAC
TTCTGGGGCA ATCCAGATGG ATCCGGGTAC TCACAGACCA CCGCCGACTC CAATGGCGAT
GGGTTCTGCG ATCAGCCCCT CGTGATCACG ACCGGAAACA CCGACAACCT CCCGTTGCAC
ACTCCGTCCG CCGTCACACC GACGGTGACC CCGACGGCCA CCACAACCCC GGGTGTTGAG
TCTCCCTACA AGGATCATAA CCTCCCGGCC CGTGTCGAGG CTGAAGACTA CGACAACGGC
GGTCAGGGTG TTGGTTACTC CGATTCCACT CCCCAGAACC TCGGTAACGC CTACCGCCTG
ACTGAAGGCG TGGATGTCGA AGCCGGAGGA AGCGGGTATG ATGTCGGCTA CATCACCGAC
GGCGAGTACC TGAAGTACAC CATCAATGTT ACGACTGCGG GCACCTACAC CGCGACCTTC
AATGTCGGGT CCTGGGAAGC CGGACGGACG ATCACCGTCA GTGATGATGA TGGAGATATC
GCCGGCACGG TCAACGTCCC GAACACCGGG AGTTCGAGCA CCTTTGTCTC TGTTCCGCTG
ACGCTGAACC TTAACGCAGG CACCCACGTG CTGAAACTGA CCTTCAACGG CAACCACCAG
AACATCGACT ACATCGACTT CAGTACCTCA GTAACACCGA CCACCACCGC CACCACAGTG
CCGACCACCA CGGTCACCGT GACCCCAACC GTGACAACGA CCGTCACCCC GGGTAATGAG
ACTCCTTACA CGCCTCACAA CCTCCCGGCC CGTGTCGAGG CTGAGGACTA CGACAACGGC
GGCGAGGGTG TCGCCTACCA TGACTCGACC GCCCAGAACC TCGGAAACGC CTACCGCCTG
ACTGAGGGTG TGGACGTCGA GGCCGGTGCC ACCGGGTATA ACGTCGGCTA CATCACCGAC
GGCGAGTACC TGAAGTACAC CGTCAATGTC GCGACCGCCG GCACCTACAC CGCGACCTTC
AATGTCGGGT CCTGGGAAGC CGGACGGACG ATCACAATCA GTGATAATGA CGGAGATGCC
GTCGGCACGG TCAACGTCCC GAACACCGGG AATGATCACA CCTACCAGTC GGTCCCAGTG
ACGCTGAACC TCGGTGCAGG CACCCACGTG CTGAAACTGA CCTTCAACGG CAACCACCAG
AACATCGACT ACATTGACTT CAGTACCTCA GTAACACCGA CCACCACCGC CACCACAGTG
CCGACCACCA CGGTCACCGT GACCCCAACC GTGACAACGA CCGTCACCCC GGGGAACGAG
ACTCCATATA AGGCATACAA CCTCCCGGCC CGTGTCGAGG CCGAGGACTA TGACAACGGC
GGCGAAGGTG TCGCCTACCA TGACTCGACT GCCCAGAACC TCGGAAACGC CTACCGCCTG
ACTGAGGGCG TGGACGTCGA AGCCGGTGCC ACCGGGTATA ACGTCGGCTA CATCACCGAC
GGCGAGTACC TGAAGTACAC CGTCAATGTC GCTACTGCGG GCACCTACAC TGCTAACTTC
AATGTCGGGT CCTGGGAAGC CGGCCGGACA ATTGCGGTCA GTGTCGATGA CACGGCTGTG
GGCACCGTCA ATGTCCCGAA CACCGGGAAT GATCATACCT ACCAGTCGGT CCCACTGACG
CTGAACCTCG GTGCAGGCAC GCACGTGCTG AAGCTCACCT TTGGTGGTAA CCACCAGAAC
ATCGACTACG TCGACTTCGG AACAGCGGCG GCTCCGACCA ACACCGTTGT TCCGATCACC
ACCATAACGG TGACGCCCAC AACGACCACC ACCCCGTCCC AGACTGTCGG GGCCTACAAG
CCTCACAGCC TCCCGGTCCG CATCGAAGCC GAGGACTATG ACAACGGCGG TGCAGGTGCT
GCGTACTATG ATACGACAGC AGGCAACCTT GGAAAGGCCT ACCGTCTGGA TCAGGACGTC
GATATCGAGG CTGGTGCCTC AGGATATGAT GTCGGCTACG TCGCCGATGG CGAATGGCTG
ACCTATACCG TTGATATTCC GTCAGCTGGT TGGTACACGG CCTTCTTCAA TGTGGCCAGC
TGGGCGGACG GACGATCGAT CACCGTTAGT GTCGACAACA CTCCAGTTGG CACGGTGCAG
GTTCCGAACA CCGGCGACTC TACCATCTTT GTAGATGTCC CGATGAACCT GAATCTCCCG
GCAGGTTCGC ATGTGCTGAA ACTGTCCTTC ACCGGAAGCA AGCAGAACAT CGATTACATC
GACTTCCCCT CAGGTCCGCA TGCCGAGATG GCTCTGACCA CCACACCAAC AGTGGTCAAG
ACAACCTCTG CAACAGCGGT GAAGAACAAC ACCACCGCGT CTGAGTGA
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| Protein sequence | MNWNMQLRNV MALAILLVLS SALLVLPATA ASIPVNGPVV ITEPGTYVLT QDITSSSQIV
CIEIKASNVV FDGQGHQISG VNNEGSAGIF VSKDASTPVT GVTIKNVRLN NWFYGVYLLN
AQNSAIQDVT TTGNANAGMV LYSGSTGNTI SGSTLTGNGR GIILSTSSGS NTISGNTLTG
NSNQGIYIFD SNGNTVNGNT ITNNTNAGLF IYSASANSVY NNNFSNLYNA LFGGTIGSNS
WNTNQATGTN IVGGPSIGGN FWGNPDGSGY SQTTADSNGD GFCDQPLVIT TGNTDNLPLH
TPSAVTPTVT PTATTTPGVE SPYKDHNLPA RVEAEDYDNG GQGVGYSDST PQNLGNAYRL
TEGVDVEAGG SGYDVGYITD GEYLKYTINV TTAGTYTATF NVGSWEAGRT ITVSDDDGDI
AGTVNVPNTG SSSTFVSVPL TLNLNAGTHV LKLTFNGNHQ NIDYIDFSTS VTPTTTATTV
PTTTVTVTPT VTTTVTPGNE TPYTPHNLPA RVEAEDYDNG GEGVAYHDST AQNLGNAYRL
TEGVDVEAGA TGYNVGYITD GEYLKYTVNV ATAGTYTATF NVGSWEAGRT ITISDNDGDA
VGTVNVPNTG NDHTYQSVPV TLNLGAGTHV LKLTFNGNHQ NIDYIDFSTS VTPTTTATTV
PTTTVTVTPT VTTTVTPGNE TPYKAYNLPA RVEAEDYDNG GEGVAYHDST AQNLGNAYRL
TEGVDVEAGA TGYNVGYITD GEYLKYTVNV ATAGTYTANF NVGSWEAGRT IAVSVDDTAV
GTVNVPNTGN DHTYQSVPLT LNLGAGTHVL KLTFGGNHQN IDYVDFGTAA APTNTVVPIT
TITVTPTTTT TPSQTVGAYK PHSLPVRIEA EDYDNGGAGA AYYDTTAGNL GKAYRLDQDV
DIEAGASGYD VGYVADGEWL TYTVDIPSAG WYTAFFNVAS WADGRSITVS VDNTPVGTVQ
VPNTGDSTIF VDVPMNLNLP AGSHVLKLSF TGSKQNIDYI DFPSGPHAEM ALTTTPTVVK
TTSATAVKNN TTASE
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