| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1812 |
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| Symbol | |
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| ID | 7270358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1916689 |
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| End bp | 1919052 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570427 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002466841 |
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| Protein GI | 219852409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.466524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT CAAAACATAC GACACTGACC TTTCTCATAC TGATACTGCT CCTGGCCGTG
GTGCTGCTGG TAGCACCCGC AGGTGCAGAA CCTGTACAGA CGAACGGAAC ATCATCCATC
GGAGTCGACC AGACCCAGGA ACTGAAAGAT TCCGCAGCCC TCCCCGCACC CCGGCATATC
TTCATCAACG TGGCGAACGA TGCCGGCGTG AAGTACAACC TGGACGGAGC GGCCCTGGGC
GGCCCGGACA ACACCTACTA TATCAAGGCA GACAACGGGG GCCTGAACGA ACTGCACATC
ACCAGCGACG TGAACGCACC CTACGGCCAG GTCACGACCT CCGGCGCCCA GTCCGGAACC
TTCTATGTCT CGAACACCGG GGGGAGGGGC TCTGATGACG ACATCATCCT CCTCGTCTCG
GTGAAGGGAC CGATCCCCGA CGATTTCAGT TTCCATGTGA AGTCGAGCGG CTATACCTGG
ACCCCGTCGA CCGTCATGAA TGCGAATCCC ACCGAATATC ACTATGTGAC AGGAGTCGAC
GAGACCTTTA CGAAGTCGGA CCTGATCTAC GGACCACAGA CCTGGAAACC CGGCTCTGGA
GATCTGCCCC TCTACTACGG ACAGGACATC AACGACGCCT CGACGGCACA GTACCTGATG
TTCATCGATC TCAAAGCCGG AAACATGAAG CCGGCAACAT TCCCGAATGA CACCCTGATC
AACAATGGAG CATTGAAGAT TGATTACAGT TTCACAAACC TGAATACCTT TGCCGCCTTC
AATGGATACG CCTGGTGCCT TTCAACGACC CAGGGGCAGG GGATCACATG GACGAACCAG
CCCTTCACCG ATGCCGCCAG CGGATACACG GTGACCGGCA TCCCACGCCC GACCACAACA
GCAACCACCA CGGTTCCAAC TTCGGCACAA ACAACAGCAA TCACCACGGT TCCAACATCA
GCACAAACAA CAGTACCGAC CACAGGTCCG ACTGCTGTGT ATACGACTGT ACCAACGACA
CGAGCAACAA CCATCGCAAC GACAGTATCT ACGTCTGTGC CGACGACACC TCCAGTGACC
CCGACTCCCA CGGTGCAGCC GCTGGTGACC AACTTCACGG CGAACGTGAC TGCCGGCCAG
TCCCCACTCC CGGTGCAGTT CAACGATACG ACGACTGGTG CAGTCCAGAG TTACTTCTGG
CAGTTCGGCG ACGGCGGTGC CTCGTTCGAT CAGAACCCTG TGCACACCTA CACGACCGCC
GGCACCTACA CCGTCTCCCT CGTCGCCAGC GGCTCGAACG GAGCTCAGGT GAAGACGATC
GAGCGGTACA TCAATGTCAC CGTACCAGCG ACACCAACCC CAACCGTGAC GATGGCAGGT
CAAATCCCCA ATCACTACCA CAACTATCTC CATGTTGCAA ACGATGAAGG TCCGCGTTTC
GACTCTTATA ACAATGGAAC CTACTACCAG GGGCAGGACA ATGGAGGGCT CAACGCCGTC
TGGCTGACCC AGAACCTGTC TACCGTTCAG GGTCAGAAGA TCACCACCAG CAATAAATCG
GGCACCTTCT ATATGATGGA TACCGGTGGC CGGGGATGGG AAGATGACGG ACTGGTGATG
CTCGCGGTCA ACGGGACGAT CCCGGATGAC TTCAAGGTAC ACATCCGGAC AAGCGGCTAT
ACCTGGACTC CGATCTCAAA GAATCTCAGA CCAACCATCG ACCAGATCAC CTATGTGGAC
GGGGCGCTCG ACGAAACATT CACAAAGGAC GATCTCATCT ATGGCCCACA GCTCTGGAGG
CCGGCAGGGG CGGCAAACTA TCCGATCTAT GACGGCCAGA ATATGACGGA TACCAACAAC
ACCTTCCGGA TAATGTTCAT CGACCTGCGT GCAGGAGTCA TCGGCTCGAA CACCACCGCG
GGATCTCCGC CCCTTCAGAA CAATGGTGGA ATCAGGGTCG ATTACTCGTT CGAAAACCTG
ACCACGTTCG CCGCCTTCGA TATCTATGGC TACTGCAAGG ACTCCAACGC GGGAGAGGGG
ATCTCATGGA CAAATGCTGT GAACACCTTC AGCCAGATCT CACACGGTCA GGCGTCGATT
GGAAGTGGAC TCTGTGTGAT TGGTGTGCCG TCTTCGACAG CCCCGATCAC TATCCCATCA
GCGACCCACC CCCCCACCGA CCCCAACGGC GACGGTCTGT ATGAAGACCT GAACGGAGAC
GGAGCTGCAG ACTTCAACGA TGTGGTCCTC TTCTTCAACC AGATGGACTG GATCGCCGAC
AATGAACCGG TCACCACCTT CGACTTCAAT AAAAACGGCT CCATCGACTT CGATGACGTG
GTCCTCCTCT TCAACATGCT CTGA
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| Protein sequence | MPDSKHTTLT FLILILLLAV VLLVAPAGAE PVQTNGTSSI GVDQTQELKD SAALPAPRHI
FINVANDAGV KYNLDGAALG GPDNTYYIKA DNGGLNELHI TSDVNAPYGQ VTTSGAQSGT
FYVSNTGGRG SDDDIILLVS VKGPIPDDFS FHVKSSGYTW TPSTVMNANP TEYHYVTGVD
ETFTKSDLIY GPQTWKPGSG DLPLYYGQDI NDASTAQYLM FIDLKAGNMK PATFPNDTLI
NNGALKIDYS FTNLNTFAAF NGYAWCLSTT QGQGITWTNQ PFTDAASGYT VTGIPRPTTT
ATTTVPTSAQ TTAITTVPTS AQTTVPTTGP TAVYTTVPTT RATTIATTVS TSVPTTPPVT
PTPTVQPLVT NFTANVTAGQ SPLPVQFNDT TTGAVQSYFW QFGDGGASFD QNPVHTYTTA
GTYTVSLVAS GSNGAQVKTI ERYINVTVPA TPTPTVTMAG QIPNHYHNYL HVANDEGPRF
DSYNNGTYYQ GQDNGGLNAV WLTQNLSTVQ GQKITTSNKS GTFYMMDTGG RGWEDDGLVM
LAVNGTIPDD FKVHIRTSGY TWTPISKNLR PTIDQITYVD GALDETFTKD DLIYGPQLWR
PAGAANYPIY DGQNMTDTNN TFRIMFIDLR AGVIGSNTTA GSPPLQNNGG IRVDYSFENL
TTFAAFDIYG YCKDSNAGEG ISWTNAVNTF SQISHGQASI GSGLCVIGVP SSTAPITIPS
ATHPPTDPNG DGLYEDLNGD GAADFNDVVL FFNQMDWIAD NEPVTTFDFN KNGSIDFDDV
VLLFNML
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