Gene Mpal_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1774 
Symbol 
ID7270320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1852924 
End bp1853463 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID643570390 
ProductCheW protein 
Protein accessionYP_002466804 
Protein GI219852372 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.298965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC CTTCAGCAGA ACCCGGGAAC ATCCTCTCGC CGCAAACGGC AAGAGATAAA 
TCGGGCGCAC TATCAGGTGA CGTTCAGGTG GTCGAGTTTC TCCTCGGAAA AGAGCACTTC
GCCATCGATC TCTTCGATGT GCGGGAGGTG GTGGAGTATA CCAATATCAC AAAACTCCCC
AACACTCCTT CCTATATCAA AGGGATCATC GACCTTCGTG GTGAGATCAC CACGATCATC
GATCTGAAAC AGCAGATGAA CATTCCGGCC GACATCGAAG TCCGGGACGA AGAGTGCAGG
ATCATCGTGC TTGATGACCG GATCACCAAG TCAAAGGTAG GTATCATGGT CGATGATGTC
TCGTCGGTCT CGACGTTCTC GCTTACCCAG GTCGACAAGA CCCGGGTGAC CACGACTGAG
GACACCACCA TCATTGGGAT CATCAAAAAG AAGACTAAAA TAAAGGAGAA GGAGATCACA
GAACTGATCA TCTGGATCGA TATCAGGTAC CTTCTCAGTT CGATCCATCA TACCCTTTAG
 
Protein sequence
MTEPSAEPGN ILSPQTARDK SGALSGDVQV VEFLLGKEHF AIDLFDVREV VEYTNITKLP 
NTPSYIKGII DLRGEITTII DLKQQMNIPA DIEVRDEECR IIVLDDRITK SKVGIMVDDV
SSVSTFSLTQ VDKTRVTTTE DTTIIGIIKK KTKIKEKEIT ELIIWIDIRY LLSSIHHTL