| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1684 |
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| Symbol | |
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| ID | 7271247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1743263 |
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| End bp | 1743973 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643570300 |
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| Product | DNA alkylation repair enzyme |
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| Protein accession | YP_002466716 |
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| Protein GI | 219852284 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.128505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACAG TTCTTGAGAG GATCAGAACA GACCTGAAGA ATAGCTGTGA TCCCACAACA
CAAAAGAACT TTCAACGATT CTTCAAAGAG GAGGTTCGTT ATTATGGGGT CAAGACCCCG
ACTGTTGGCA AAATTGCAAA AAGATACTGG AGTGAAATAA AATCCCAGAA TAAGCAGGAG
ATATTCAACC TCTGTGATGA ACTCTACCGC TCTGATTACA CTGAAGAGGC TTTTATCGTC
TCCAATTGGG TTCCAAACCT GGCTGATAGA TACGAGATTA CTGATCTCGC CGTATTTCAG
GTCTGGATCG AAAAATATAT CAACAACTGG GCAAAGTGCG ATGGGTTCTG TAACCATACC
CTCGGCACAT TTATTATGAT GTATCCTGAG TGCATTGAAA AGTTAAAAAA ATGGACTCAG
TCTGATAATC GATGGCTGAA GAGGGCAGCA GCCGTGTCAT TGATCCTCCC GGCAAAACAG
GGGGAATTCC TTGACGACAT CTTTGAGATC GCTGATCGTT TACTGACTGA TCGGGAGGAT
CTGGTGCAGA AAGGATATGG GTGGTTACTC AAGGAGGCGA GTCGTCATCA TCAGGACGAG
GTCTATCTCT ATGTGCTAAA GAACAGAAGC ACGATGCCGC GAACAGCGCT TCGGTACGCC
ATCGAACTGA TGCCCCTGAA ACGAAGAAAA GAAGCGATGA AGCGCGGATG A
|
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| Protein sequence | METVLERIRT DLKNSCDPTT QKNFQRFFKE EVRYYGVKTP TVGKIAKRYW SEIKSQNKQE
IFNLCDELYR SDYTEEAFIV SNWVPNLADR YEITDLAVFQ VWIEKYINNW AKCDGFCNHT
LGTFIMMYPE CIEKLKKWTQ SDNRWLKRAA AVSLILPAKQ GEFLDDIFEI ADRLLTDRED
LVQKGYGWLL KEASRHHQDE VYLYVLKNRS TMPRTALRYA IELMPLKRRK EAMKRG
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