| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1638 |
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| Symbol | |
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| ID | 7272180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1683895 |
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| End bp | 1684542 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570251 |
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| Product | putative cobalamin biosyntheis protein M |
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| Protein accession | YP_002466673 |
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| Protein GI | 219852241 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.092497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCATA TACATCTTCC AGATGGATCG TTCACCCTTC TTTGGGTAGT AGTATGGTGG
GTTGTGACCG GGGTGTTGAT CGCAGGGTCA CTGTACCTGT TGCGGAGGAA GGGACCGCTT
GATAGCAGAA AGATCACCAT CGCCGCCTTC TGTACAGCAG CCTGTTTTGC AGTCTTTCAG
GTGAGTATCC CGCTCTTCGG TGGAGTCCAT ATCAATCTGA CCTCCCTGAT CGGGATTCTC
ACCGGTCCCC TGATCGGGAG TCTGATCGTC TTCATCGTCA ATATCCTCTC CGCCGGTATC
GGGCATGGCG GATGGGGAAT GGTCGGAGCC AACACCTTCG TCAATATCAT CGAGGTTGTT
ACGGCCTACG CGGTGTACCG CGGAACCGGG CGGTTCCTCA CCGGAACCTT CTCCCGTGCC
GGCATCGCAA CCCTCATCGC CCTCGTTTTT GGCAGTGTGG GAATGATCGG GGTTATTCTG
ATCTCCGGTG TGCAGGGGAC GGAACAGACG ATGAGTCAGA CACTGTACGG ACTCTCTCTT
CTGACGGTGG TGAACCTCGG GGTTGCAGTC ATCGAAGCCT TCGTCACCGG ATATATCGTG
ACCTATATCA AGAGGGTGAG ACCGGCGATG ATGCCAGAGG AGAACTGA
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| Protein sequence | MAHIHLPDGS FTLLWVVVWW VVTGVLIAGS LYLLRRKGPL DSRKITIAAF CTAACFAVFQ
VSIPLFGGVH INLTSLIGIL TGPLIGSLIV FIVNILSAGI GHGGWGMVGA NTFVNIIEVV
TAYAVYRGTG RFLTGTFSRA GIATLIALVF GSVGMIGVIL ISGVQGTEQT MSQTLYGLSL
LTVVNLGVAV IEAFVTGYIV TYIKRVRPAM MPEEN
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