| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1633 |
|---|
| Symbol | |
|---|
| ID | 7272175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1679886 |
|---|
| End bp | 1680251 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643570246 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_002466668 |
|---|
| Protein GI | 219852236 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.497237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAT ATAAACCGGA ACATCCGGAT ACACACGACC AGAGGAGAGC AGAACTCTAT
GCAAAGGTGC TTTCTCTCAA GGACCTTGTC GAATATTCGG AAGGGACCGT CTCAAGTCGG
ATGATTGCAA ACCGCAAGGC CGGCAGCATC ACAATATTCT CGTTCGATGA GAACGAGGGT
CTCTCCGAGC ATACCGCCCC CTACGATGCG GTCGTGACGA TCCTGGATGG CGAGTGCGAG
GTCTGGGTGG CCGGCCAGAC CTACCAGATG AAGGAAGGGG AGACGATCAT CTTTCCGGCC
AATGTCCCCC ATGCCCTCTC GGCCCTCACG CGGTTCAAGA TGTCGCTGAC GATGATCCGC
GAGTGA
|
|---|
| Protein sequence | MAEYKPEHPD THDQRRAELY AKVLSLKDLV EYSEGTVSSR MIANRKAGSI TIFSFDENEG
LSEHTAPYDA VVTILDGECE VWVAGQTYQM KEGETIIFPA NVPHALSALT RFKMSLTMIR
E
|
|---|
| |