Gene Mpal_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1622 
Symbol 
ID7272164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1668758 
End bp1669300 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content55% 
IMG OID643570235 
Producthypothetical protein 
Protein accessionYP_002466657 
Protein GI219852225 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.283408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAT CTGATTCAAA CTGTCTGATC GCCTATTTTT CGCGCCCAGG CAACAACTAT 
GTCGACGGAG GGATCGTGAA CCTGCCGGCC GGCAACACTG AAGTCGTAGC AACGATGATC
CGGGAAATAA CCGGGGGTGA TCTGTTTCAT ATCGAATCGG TGACTGCGTA TCCCGAGGAT
TATACAGAGA CCACCGAGGT AGCCCAGCAG GAGCTTCGCG CCAATGCTAG ACCGAAGCTC
ACCCATCACC TGGAAATTCC GGACTCCTAT GATCTGATCT TCCTCGGCTA CCCCAACTGG
TGGGGAACGA TGCCGATGCC GGTCTTCACC TTCCTGGAGG AATACAATCT CGCCGGAAAG
ACCATCGCCC CGTTCTGCAC GCACGAGGGA AGTGGCATTG GGCGGAGTGT CGCAGATATT
AAAAAAACCT GCCCGCAGTC AACCGTCCTG CATAGTCTTG CCATCCGTGG CGGCAGGGTA
AAAAAAGCAC AGGATGAGAT AGCCGGGTGG CTGCAGGAGA TCGGATTGAC TGCGAACACG
TAA
 
Protein sequence
MNVSDSNCLI AYFSRPGNNY VDGGIVNLPA GNTEVVATMI REITGGDLFH IESVTAYPED 
YTETTEVAQQ ELRANARPKL THHLEIPDSY DLIFLGYPNW WGTMPMPVFT FLEEYNLAGK
TIAPFCTHEG SGIGRSVADI KKTCPQSTVL HSLAIRGGRV KKAQDEIAGW LQEIGLTANT