| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1565 |
|---|
| Symbol | |
|---|
| ID | 7271110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1612805 |
|---|
| End bp | 1613827 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643570179 |
|---|
| Product | translation factor pelota |
|---|
| Protein accession | YP_002466601 |
|---|
| Protein GI | 219852169 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1537] Predicted RNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00111] probable translation factor pelota |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.718031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCG ACGTCCAGGA GATACGACAG GGATACGGGG AGATACGCCT CTTCCCCGAA
TCGGTCGACG ATATCTGGCA CCTCTCCCAC CTGATCGCAC CGGGGGATCT TGTCTTTGCA
CAGACCTTCC GGTCTGTCGA GACGGCCACC GACAAACTCC GGCCGGAGAA GGCCGAGAAG
CGGCCGGTCC GGATCGGGAT CCGGGTCGAG AAAGTGGAGT TTCACCAGTA CTCGTCCAGA
CTCAGGGTCA CCGGTTTGAT CGAGTCCGGG CCTGACGTCG GTTCATACCA CACCCTGAAC
CTTGAGCCGA ACTTCGAGGT CTCGGTGATC CGATTCTGGT CGAAGAGCGA CCGCGAACGG
GTCGACCGGG CGGTGAACTC ATCCGGGAGC GGACTGGTCC ACGTGCTCGC CATCGAGGAG
GGCGAGGCCG AACTCTTCCG GATCCGGCAG TACGGCCCCG AACAGGTACT GACGATCACA
ATGGGGAGCG GCAAGGGAGC ACCGGTCGAT TCCCGGGAGG GATTCTTCAT CGAGGCGGCC
ACGCCCCTGC TCCAGATCAC CGGACCGGTC ATCATCGCCG GCCCCGGGTT CATCAAGGAC
GATTTTGCCA GATTTTTAAA GAACCGGTAC CCTGCGATCG CGGCCAACTC GATGGTTGTT
GAGACCCGGC GGATCGGCCG GGGGGCCGTT CAGGAGGTGA TCGGGCAGGG AGTGATCGGC
AAGATCGCCG GCGATCTGCA GCTCGGTCGC GAGGTGCAGG TGATGGACGA GGTGCTGAAG
CGGATCGCCA TGGAAGGCTT GATCACCTAT GGCCGGGCAG AGGTCGGCCA GGCGATCTCG
TTCGGGGCTG CGGACCAGGT GATCGTCTCT GATCGCCTGA TACGGGATCC CGAAGTGGCC
CGGCTGATGG AGCAGGCCGA ACAGATGAAC GCCACTGTGA CCGTCCTCAG CAGTTGTTTT
GAACCCGGAG AACGGCTCTG GGCGCTCGGC GGCATCGCTG CGCTGCTCAG GTACGCCCTC
TGA
|
|---|
| Protein sequence | MKADVQEIRQ GYGEIRLFPE SVDDIWHLSH LIAPGDLVFA QTFRSVETAT DKLRPEKAEK
RPVRIGIRVE KVEFHQYSSR LRVTGLIESG PDVGSYHTLN LEPNFEVSVI RFWSKSDRER
VDRAVNSSGS GLVHVLAIEE GEAELFRIRQ YGPEQVLTIT MGSGKGAPVD SREGFFIEAA
TPLLQITGPV IIAGPGFIKD DFARFLKNRY PAIAANSMVV ETRRIGRGAV QEVIGQGVIG
KIAGDLQLGR EVQVMDEVLK RIAMEGLITY GRAEVGQAIS FGAADQVIVS DRLIRDPEVA
RLMEQAEQMN ATVTVLSSCF EPGERLWALG GIAALLRYAL
|
|---|
| |