Gene Mpal_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1550 
Symbol 
ID7271095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1600585 
End bp1601328 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID643570164 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_002466586 
Protein GI219852154 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACATCA CGCCTGTACA GCGAAAGTTC CTAGGTCCAG TCCTGGCCCT GCTCCAGTTC 
TGCACGGTCC TTCCCCTCGG AGCACCGCAG GACTTCGAGC AGTTCGGCCG GCGGTCGTAC
CTCTATCCGA TCGCCGGGTA CGTGACCGGC GGGATCGCCG GCGGGGTCGC GTTCCTGATC
CCCAACCCCT CGATCAGGGC CGCCGTCGCC CTGGGAGCCC TGCTGCTGGT CACCGGGTGC
AACCATCTGG ACGGGCTCCT CGACTTCGGG GACGGGCTGA TGGCGCATGG GTCCCGGGAG
AAACGGGTAC AGGCGCTGAC CGACCGGCAG ATCGGGGCCG GCGGTGTGGC GATGGGTATG
ACCGTCCTGC TGCTTGCATA CTCGGCGCTC ATATCAGTAC CGCACCTGTT CTGGGCTGTC
CTCGCCGCCG AGGTCTTCGC AAAGTACGCC ATGGCCGCCC TGACTGCCTG GGGGAAACCG
TTTCGCGAGG GTATCCAGAG TTATCTGTAC GGGTTCTCCA GGCCGGCCTT TCCGGTCTAT
GCGGCAGTCT TCTGCCTGCC ACTGCTGCTG ACCCCGATCG GGTGGGCCGG GCTTGCCGCT
GCCGCTGGTG CGACGCTGGC CGCCCTCACC CTGATGCTGC TGCTGGCCCG CCGACTCTTC
GGCGGTGTGA ACGGCGACGT GGTCGGGGCG ACAGGGATGC TCACCTTTGC ACTGGTGCTG
GCCGTCCTTG CCCTTGCCGG ATGA
 
Protein sequence
MYITPVQRKF LGPVLALLQF CTVLPLGAPQ DFEQFGRRSY LYPIAGYVTG GIAGGVAFLI 
PNPSIRAAVA LGALLLVTGC NHLDGLLDFG DGLMAHGSRE KRVQALTDRQ IGAGGVAMGM
TVLLLAYSAL ISVPHLFWAV LAAEVFAKYA MAALTAWGKP FREGIQSYLY GFSRPAFPVY
AAVFCLPLLL TPIGWAGLAA AAGATLAALT LMLLLARRLF GGVNGDVVGA TGMLTFALVL
AVLALAG