Gene Mpal_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1546 
Symbol 
ID7271091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1597983 
End bp1598543 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID643570160 
Productprotein of unknown function UPF0153 
Protein accessionYP_002466582 
Protein GI219852150 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG CTGAACACGG CGAGAGGGAG CAGTATGCCG CCGCGATCGC TGATACCGGA 
TTCACCTGCT CCCGGTGCGG AGCCTGTTGC CTGGGGGCCG GGGTGGATGC AAGTCTGGTG
ATCGTGGCGC CGCCTGAGAT CAGAAGGATC ATCCAGGCGA CCGGACTCGA CTGGAACCAG
ATCGTCGAAC CGTTCCCCGA GCCGCTGACC GCCGCTGATG GGTCCACGTA TACCTTTGAA
TGGGCGCTTC GTCGGAGCGA GGGACGATGC ATCTTCGCAG AGAGCGACCG GTGCACCATC
CATCCATACC GGCCCTGGAT CTGCAGGACC TACCCGTTCA TGCTGGACGG AGACCGATTG
GTCCGGTCGG AGTGCAATGG ATACGGAGAG AGCCGATCGG TGACTCATGA TGATCTGACT
CTGGCCGACG ATCTGATCGC ACGAAGAGAT GCCGAAGAAC TGGAAGAGAT AAAGGTGAGA
GAGATCTATA GAAATGCAGC AATTCCTGCG GGATGTTCCG TTGTGATCGA TGGTGAAGGA
ATGAAGGTGC TCGATGGGTG A
 
Protein sequence
MDKAEHGERE QYAAAIADTG FTCSRCGACC LGAGVDASLV IVAPPEIRRI IQATGLDWNQ 
IVEPFPEPLT AADGSTYTFE WALRRSEGRC IFAESDRCTI HPYRPWICRT YPFMLDGDRL
VRSECNGYGE SRSVTHDDLT LADDLIARRD AEELEEIKVR EIYRNAAIPA GCSVVIDGEG
MKVLDG