| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1545 |
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| Symbol | |
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| ID | 7271090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1596794 |
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| End bp | 1597990 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643570159 |
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| Product | TraB family protein |
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| Protein accession | YP_002466581 |
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| Protein GI | 219852149 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAGG TTCGGCTGAT CGGAACAGCC CATGTATCGC AGGAGAGTGT CGACGAGGTG
CTGGCTGAGA TCGATGCGTT CACGCCGGAC GTGATCGCGG TCGAACTCGA CGCAGGCCGG
TATGCCGGCC TGAAGAAGCA GGGTGAAGCG CCCGAGGTCG ACGATATCCT GAAGGGGGGC
AACTTCAACC AGCTGCTGAT CCAGTGGGTG CTCGGGTACA TCCAGCGGAA GATCGGGATG
GATGTCGGGG TCGAACCCGG TGCAGAGATG AAGGCCGCTA TCCAGGCCGC AGAGGAGCGC
GGGGTGCAGA TTGGGCTGAT CGATCGGGAT ATCGGGATCA CGCTTCAGCG GTTCTGGGGC
GGCATGACCA TCTGGGAGAA GTGCAAGATG ATCTACGCCC TCGGCGCCTC GCTGATCGGA
GTTGACGAGG GGGAGATCGA TATCGAGTCG CTGAAGCAGC AGGACGTGAT CTCGGCCGCA
CTTGAGGAGT TCAGAAAGTT TTCACCGAAT GGGGCGAAGG CCCTGATCGA TGAGCGGGAT
GCATACCTCG CTCACCAGAT CATCGGCCTA TCTGGACGGT TCGAGCGGGT GCTGGTCGTG
ATCGGGGCCG GTCACCGGAA GGGTATCGAG GGGTACCTGC TCGACCCGGC ATCCCTCCCG
CCGATGGCCG ACCTGACCAC GAAGGCGAAG TCATACCCCT GGGGGAAGAT CATCGGGATC
GTGATGATCC TGATGTTTGC ATTTATCCTT ATCACGATCA TCTTCTCAGG CGTCGGGTTC
AACGTGCTGC TGTGGGCACT GCTGTACTGG GTGATCCTGC ACGGGGTGCT GACCGCCGTC
TTCACCCTGG CCGCGGGCGG CCACCCGCTC TCAGCTCTGA CCGGTTTTCT CGTCTCCGGG
TATACGGCTG TCAACCCGAT CCTCGCTGCC GGCTGGTTCT CTGCGATCGT CGAGGCAAAG
ATCAGAAAGC CGACAAAACA GGATCTTCAC AAGATCTTCG AGGCAGAGTC CTTCAGCGAG
ATGCGGAAGA ACTCGCTCTT CCGGGTGGTG ATGGTCGCTG CCCTCGCAAA CGTCGGGTCG
ACGATCGGGA CCTTCGCCTA CTTCTTCCTG ATCTTTCCGG CACTCGGGAT CGACCCGGGT
GTGATGATGG GGCAGGGCAT GACCAACTTC TGGCACTGGC TCACCATGCT GATCTGA
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| Protein sequence | MGEVRLIGTA HVSQESVDEV LAEIDAFTPD VIAVELDAGR YAGLKKQGEA PEVDDILKGG
NFNQLLIQWV LGYIQRKIGM DVGVEPGAEM KAAIQAAEER GVQIGLIDRD IGITLQRFWG
GMTIWEKCKM IYALGASLIG VDEGEIDIES LKQQDVISAA LEEFRKFSPN GAKALIDERD
AYLAHQIIGL SGRFERVLVV IGAGHRKGIE GYLLDPASLP PMADLTTKAK SYPWGKIIGI
VMILMFAFIL ITIIFSGVGF NVLLWALLYW VILHGVLTAV FTLAAGGHPL SALTGFLVSG
YTAVNPILAA GWFSAIVEAK IRKPTKQDLH KIFEAESFSE MRKNSLFRVV MVAALANVGS
TIGTFAYFFL IFPALGIDPG VMMGQGMTNF WHWLTMLI
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