Gene Mpal_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1538 
Symbol 
ID7271083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1591786 
End bp1592355 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content56% 
IMG OID643570152 
Productprotein of unknown function DUF99 
Protein accessionYP_002466574 
Protein GI219852142 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCG AAAAGAAGGG TCTTCGGGTG GCCGGGATCG CTGAGAGTTT TTTCGGCTCA 
TCCCGATCGA CCCTGGCCTG TGTGGTGATG CGCAGAGATC TTCGGATCGA CGGAGTTGCG
TTTGGTTCGA TGACGGTCGG CGGCATGGAT GCGACCAGGT CGATCATCGA CCTGATCGAT
GATTCGAACC GAAAGGATGT GAATCTGGTG ATGATCAGCG GATGTGTAAT CGCCTGGTTC
AACATCATCG ATCCAGAGGC CATCAGTCAG GCCACAGGTC TCCCTGTGAT CGCGGTCACG
TACGAAGAAT CTGATGGACT GGAGAATGAG ATCTGCAGCC ATTTTCCTGG TGACCAGGCC
CGGCTCGCGC AGTACCGTAA CCTTGGAGAG AGAATACCCT TCCTTCTCTC TACTGGAAAG
AGCCTTTACC TTCGACTCGC CGGCATCAAC ATTCAAGAAG CCGGGTTCAT CTGCGATCAG
TTCACCTTCG ACGGCAGGAT CCCCGAACCC CTTCGGGTCG CGCGGCTCAT GGCGCGATCT
CTGATGCGCG GTACCGGCTC CGCGAGATGA
 
Protein sequence
MHLEKKGLRV AGIAESFFGS SRSTLACVVM RRDLRIDGVA FGSMTVGGMD ATRSIIDLID 
DSNRKDVNLV MISGCVIAWF NIIDPEAISQ ATGLPVIAVT YEESDGLENE ICSHFPGDQA
RLAQYRNLGE RIPFLLSTGK SLYLRLAGIN IQEAGFICDQ FTFDGRIPEP LRVARLMARS
LMRGTGSAR