Gene Mpal_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1530 
Symbol 
ID7271075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1586233 
End bp1586913 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID643570145 
Producthypothetical protein 
Protein accessionYP_002466567 
Protein GI219852135 
COG category[S] Function unknown 
COG ID[COG5423] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACA ACAACAAAGA TGAGAATGAG CAGGTGGTGG CGATGATTCC TGAAAGGAAC 
AAGATCAGGG AGTTTGCCTT TCTCAGGCAG AAGGCCCTGG ACCTGGGTGC CCTGGATGCA
ACGGTGATTC AGACCACGGA TGTCATCGTC GAAAACCGGG TCCCGCTGAA ATGCCGGGCC
GGGTGTATCG GGTATGGAAA GAAACTCACC TGCCCGCCGT ACGTCCCGAC CCCGGACGAG
TTTCGGAAGA TCCTCGCTGA GTATCGGTTT GCCCTGCTCG TGAAGTTTAC GTCGCCGGCC
GTTACCGACC CTGAGGTCAT CTGCTCTATC TACAAGTACT GGCTCGACCC GGACGCTCCG
GCAGACCGGA AGGAGAAGGC GACACAGTTC TGGCAGGATT ATTTTGTTGG CAGCAAGGAC
TGCGCCCCAA TCATGCTCGA ACTGGAAAAG ACGGCATTCA ACGCCGGCTA CACGCTCGCC
CTTGCATTCG TCAATGGATC GTGCCGGCTC TGCGAGACCT GCAATGTCAA GGGCGGCATC
TGCCTCCATC CCACGCAGGC GAGGATCCCG GAACATGCGG TGGGGATCAA CATGAAGAAG
ACTGCAGAAA ATGCAGGGAT GCCGATCCGG TTCCCGGTCG CCGGGCACCC GGAACCGATG
GCGATAGTAC TGATCGATTA A
 
Protein sequence
MIDNNKDENE QVVAMIPERN KIREFAFLRQ KALDLGALDA TVIQTTDVIV ENRVPLKCRA 
GCIGYGKKLT CPPYVPTPDE FRKILAEYRF ALLVKFTSPA VTDPEVICSI YKYWLDPDAP
ADRKEKATQF WQDYFVGSKD CAPIMLELEK TAFNAGYTLA LAFVNGSCRL CETCNVKGGI
CLHPTQARIP EHAVGINMKK TAENAGMPIR FPVAGHPEPM AIVLID