Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1490 |
Symbol | |
ID | 7270095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1536223 |
End bp | 1537050 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643570112 |
Product | nitroreductase |
Protein accession | YP_002466534 |
Protein GI | 219852102 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.628384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.490077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAC CAGTACTGAT CGATAACGAT CGCTGCACGG GCTGCGGGAT CTGCAGCCGC GTATGTATCT TCTCTGTTCT CTCTCAGGAC AACAACGGCA CCGTTCCCCG GATTAATCCG GAACAACATG GACGGTGCGT ACGATGTGGC CAGTGTGAAA CATTCTGCCC TTCATCAGCA ATTTCGGTGA AGTACCCGGC TGCGTGGCCA ACACCGGATC AGCCAGCTCC CGGGTCCGTA ACCCCGACAC AGATCCGGGA GCTCGTACAG GGTAGAAGAA CCGAGCGGCA GTTCCGGCGC CAGCCAGTCC CCAGGGAGAC GATCGAATCG ATGCTTGATA TCGTCAGGTA TGCACCGAGT GCAGTCAACC TCCAGCCAGT ACACTGGCAG ATCATCGAAA AAGAGGAGTC ACGGAGAGCG CTTACTGCCG GGGTGGTCCG GTGGCTTGAT GAGGCTTCCC GGAACGGCTG GTATCGCGAA CTGGATGCCT GGCTTCCCGA ACTGATCCGG CAATGGAACG AGGGGACCGA TCTGATCACC CACGGCGCCC CGTGCATCAT CATAGCCCAT ACTCCCCGGA CATCCCCTGC GTTTTACACG GACGCTGTGA TTGCACTCAG TTATCTCGAT ATCGTCGCCC CGGTTTTTGG TATCGGCACC TGCTGGGCAG GGCTAGTTCG CAAGGCCTGC GAAAACTCAC CCGAAGTTCA GAAACTCACC GGCATCCCGG AAGATCATAT GGTACAGCAT GCGATGCTGG CCGGCTATCC CGCCCTGCAG CACCACCAGA TACCGCGACG GCAGCCGGCC CGGATCGGCT GGACATAA
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Protein sequence | METPVLIDND RCTGCGICSR VCIFSVLSQD NNGTVPRINP EQHGRCVRCG QCETFCPSSA ISVKYPAAWP TPDQPAPGSV TPTQIRELVQ GRRTERQFRR QPVPRETIES MLDIVRYAPS AVNLQPVHWQ IIEKEESRRA LTAGVVRWLD EASRNGWYRE LDAWLPELIR QWNEGTDLIT HGAPCIIIAH TPRTSPAFYT DAVIALSYLD IVAPVFGIGT CWAGLVRKAC ENSPEVQKLT GIPEDHMVQH AMLAGYPALQ HHQIPRRQPA RIGWT
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