Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1469 |
Symbol | |
ID | 7270074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1516881 |
End bp | 1519088 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643570092 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_002466514 |
Protein GI | 219852082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGG AAGACAAGTT TTCACGAGAA GAACCGATCA TGACACGTTC ACGTCTGCCG CTTGTGGTCC TGATGATCCT CGGAGCCTGG TTCATTATCC ACACCGCAGG TGCCGTATCC CTGACGATCG ATTATCCGTC ACCGAACGAG ACCACGATGG CCGAGATGCG CGACTTCTAT GTGACCGGTG CCATTCCGGC CGGAATCACA ACCCCGGGCG ACGTCCGGAT CGAGGTCTTT TCCGGGGCGA GCGCCGTCGG CACCCCGGTT CGGACCCTCG AGAGCCACGT CGATCCCTTA ACCGGGACGA CCCCTCTCTC GGCGATCGCG GCCGACTATC CCAATGGATC CGCGAAGGGC ACCGTGATGG TCCCGGACCT GGTCAGCGAA CCGGGCGGTC TCCTTGAGAC CTGGAACAAG GTGATCGTGA CCCCCGAGTA CTACTCGGGC CTCGTGCTGG GTGGGGCCAC AAAGCAGTTC GATACCACCT ACACAGACCG CGACGGCCGG CCCCTTCACG ATCTCGTCGC GGGCGAGTTT ACGATCCGTG TGACCGGGCT CTCGGGTGAT CTGCACGGGC TCACGGCCGA GAAGCAGATC ACTCTCGGGA AGACGCACGC GGCACTCGGA CGGTTTTCAC CTCCGGCGCA GGTGAACCGG CTGACCGCGT TCGCCCGGGA GAACGGGTAC CGGACCTACA TCGATTCCTT TCCCGGGTAC TTCTTCTGGA ACAACACCGG CTATGTTATT CCAGGCCGCT GGGTCAGAAA CAATGCGATC GAGGTCGTGA ACGACTGTCC GGGCACGACC GTCGACACGG TCGGGGCTGC CGAGAACGAC CTCTTCCTCT ACAACATCCG CAACACCTCG GCCACCTATA CCATCGAGAC CTCGACGCTC ATCCGCACCG GCATGGTCGA CTCGCCCCAG ACGGTGTATC ATTATTATAC GGCAGGCGAA CCGGTGTATA CCTATACCGC CCGCGAGAAC GGATCCCGGG TCTCGTTCAA TTCGACCCTC TCGACCCTCG CACACGGCGA CAGACTCGCC CTCACACGGG CCGAACTCCG CATGGAGAAT GATTCCGACC CGATCGTCGA CCTGGCCGAC ACGACACAAA AACGGCTCGA CCTTCTCCCC GGCGACGGGA TCGACGTCGA ATCCGACGAG ACCTGCCTCC TCTACGGCGT GGTTGCACCG ATCCCGGCTC CGGTCGTACC CGGTCCGTCC GGAAAAGACG GCACACCGAC GAACCGGATC GCCTCGATCG AATGGACACT GGTGGATGCC GGGGGTGCTG CGGTGGCAAA CTCGACCATC CCGGTCGAAC TCGGACGGCG GACCGATCCA GCAAAACCCT CGGAGATCAC CACCTCGTTG TACGAGTTCG GCGGAGCGAT CGGCACCGGG ACGCCACCCG GCCGGTACAC CCTCTCCATC AAGGGGCTGG ACGAGACCGG TACGGCGGTG GACGGCACGA CCGAGGAGGT GCCTTTGTGC ATCGATGCTA CTCCGACCCC GACCCCTGAG CCGAACACCA ATCACCTGGT ATCGGGCCGG ATCGAGGTTG AGGACTACGA CCTCGGCGGG GAAGGGGTCG CCTACCACGA CACCACCGCC GGCAACGAGG GCGGGGTCTA CCGGCAGGAC GACGTCGACA TCGAGATGAC CGGAGGCGAG AAGACGCCGA ATGTCGGCTG GGTCAGGGAC GGGGAATGGC TCTGTTACAC AACGAACGTC ACCCAGAGTG GGAACTATAC GGTGACAGCC CGCGTGGCAA GCCCGCATTC GGGCCGGCAG ATAACGCTCT CGGTCGCCGG CGGGGATACT GCGTCGATCG CAGTCCCTGA CACAGGATCC TTCGCCACGT TCGCGAACGT CACCGTCCCG ATCCACCTGA CTGCAGGGAC GCATTCCCTG GTCCTCACCT TCTTCGGCGA CGGCCAGAAT ATCGACTGGC TCACGTTCAC CCAGGAGACC GTCCCGATTA AAATCGTCCC CGGCGGGTCC GGTATCCCGC TCGACCTGAA CGGGGATGGA TGGTACGAGG ACGTGAACGG CAACGGGGTC TTCGATTTCC ATGATGTGGT CCTCTTCTTC AATCAGATGG ATTGGATCGA GGCGAACGAA CCAGTCGCCG GCTTCGACTT CAACGGGAAC GGTCGGATCG ACTTCAATGA TATCGTCACC GTGTTCAACG AGGTATAA
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Protein sequence | MTSEDKFSRE EPIMTRSRLP LVVLMILGAW FIIHTAGAVS LTIDYPSPNE TTMAEMRDFY VTGAIPAGIT TPGDVRIEVF SGASAVGTPV RTLESHVDPL TGTTPLSAIA ADYPNGSAKG TVMVPDLVSE PGGLLETWNK VIVTPEYYSG LVLGGATKQF DTTYTDRDGR PLHDLVAGEF TIRVTGLSGD LHGLTAEKQI TLGKTHAALG RFSPPAQVNR LTAFARENGY RTYIDSFPGY FFWNNTGYVI PGRWVRNNAI EVVNDCPGTT VDTVGAAEND LFLYNIRNTS ATYTIETSTL IRTGMVDSPQ TVYHYYTAGE PVYTYTAREN GSRVSFNSTL STLAHGDRLA LTRAELRMEN DSDPIVDLAD TTQKRLDLLP GDGIDVESDE TCLLYGVVAP IPAPVVPGPS GKDGTPTNRI ASIEWTLVDA GGAAVANSTI PVELGRRTDP AKPSEITTSL YEFGGAIGTG TPPGRYTLSI KGLDETGTAV DGTTEEVPLC IDATPTPTPE PNTNHLVSGR IEVEDYDLGG EGVAYHDTTA GNEGGVYRQD DVDIEMTGGE KTPNVGWVRD GEWLCYTTNV TQSGNYTVTA RVASPHSGRQ ITLSVAGGDT ASIAVPDTGS FATFANVTVP IHLTAGTHSL VLTFFGDGQN IDWLTFTQET VPIKIVPGGS GIPLDLNGDG WYEDVNGNGV FDFHDVVLFF NQMDWIEANE PVAGFDFNGN GRIDFNDIVT VFNEV
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