| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1399 |
|---|
| Symbol | |
|---|
| ID | 7270004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1446056 |
|---|
| End bp | 1447114 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570030 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_002466452 |
|---|
| Protein GI | 219852020 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAT TAGCAAGAAC AGGTCGTGGA GCACCCGGCT GGGTTGAGAA GGTCAAGCCC
GTCGCAGGTC CACGTGACGC AATCATCAGA GCCATAGCTA TTGCACCATG CAACTCAGAT
GTGCACTTAA TCTGGGGAGA GATGGGCGAC TTTCTGCCAA GCGACCGCAT CTTCGGCCAC
GAAGCAGTCG GTGTCGTCGA CTCGGTCGGC AACGATGTCA AGGACTTCAA GGTAGGGGAC
CGGGTTGTCG TCCCCGCAAT CACGCCGGAC TGGGGCACTG TCGCCTCGCA GCAGGGCAAT
CACCAGCACT GCAGTGGGCC GCTCACAGGC ATGCCGTTCG ACATGCTCAA GGACGGCACC
TTCGCGGAGT ACTTCCACGT CAACGACGCA GACGCCAACC TCACGTTGCT CCCAGACGGT
GTCACCCTCG AGCAGGCCGT TATGGTCGTC GACATGATGA CTACGGGCTT CTACGGCGCC
GAGATGGCCG ACGTCAAACT GGGGTCGACC GTCGCCGTCT TTGGCATTGG GCCGGTCGGA
CTGATGGCCG TGGCCGGTGC TCATCTGATG GGCGCCGCAC GGATCCTCGC CGTCGGCAGC
CGCTCGAACT GTGTGGATCT CGCCAAGGAA TACGGGGCTA CCGATATCGT TGATTACCAC
AAGGGCGATA CGGTCAAGCA GATCATGGAT CTGACCGATG GCAAGGGCGT GGATGCCGTG
GTGGTGGCCG GGGGGAACGC CAGCACCATC GGCGAAGGCC TTGAGGTCCT GAAGTTCGGT
CACACTCTTG CCAACCTGAA CGTCATGGAG GAAGCGATGT TACCCATCCC CCTAGCACCC
ATGGCATTCG GTCTCGGCGG CAAGACCATC AAGGGGAATT TGTGTCCCGG TGGAAGGGCC
AGGATGGAGC AGATGCTCGC CCTCGTGAAG GCCGGCCGGG TCGACCCGGG TAAGCTGATC
AATTACCGGT ACACGAAGTT TGAGGATCTC TTACCGGCCC TGATGGTCAT GCACGACAAG
CCGAAGGATC TGATCAAGTC TGCAGTGATC CTCGAGTAA
|
|---|
| Protein sequence | MKGLARTGRG APGWVEKVKP VAGPRDAIIR AIAIAPCNSD VHLIWGEMGD FLPSDRIFGH
EAVGVVDSVG NDVKDFKVGD RVVVPAITPD WGTVASQQGN HQHCSGPLTG MPFDMLKDGT
FAEYFHVNDA DANLTLLPDG VTLEQAVMVV DMMTTGFYGA EMADVKLGST VAVFGIGPVG
LMAVAGAHLM GAARILAVGS RSNCVDLAKE YGATDIVDYH KGDTVKQIMD LTDGKGVDAV
VVAGGNASTI GEGLEVLKFG HTLANLNVME EAMLPIPLAP MAFGLGGKTI KGNLCPGGRA
RMEQMLALVK AGRVDPGKLI NYRYTKFEDL LPALMVMHDK PKDLIKSAVI LE
|
|---|
| |