| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1398 |
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| Symbol | |
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| ID | 7270003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1444434 |
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| End bp | 1445789 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570029 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002466451 |
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| Protein GI | 219852019 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCA CGGAAATGTA CCAGGAGAGG TTCAAAAGGA TTATCGAATT GCTCGAGCAA
CACGCATCCA CGGGCCTGAC CATAACCGCT GTCGCCCAGA ATCTCGCCAT CCCCCGGAAT
TCTGCCTCCA AATATCTCGC ACTCCTCGCT TCGAAAGGAG ATGTGAGTGT AGAGCAATTC
GGCCAGAAGA AGTTCTATCG CCCGATGCCG CGTGTACCGC TATTGGATAT CTTCGACCGC
CTGCCGTATG CTATCGTGAT CCTGGACGCC GACCTCCAGG TTCGGATGGT GAACATGAGT
TTTGTCACCG AACTCGGCAT CCTTCCCGGG CGCAACATCA TAGGCATCCC GCTCTTCGAC
CTGGATCTCC CGATCTTCGC CGAGCCAGTG GTGCAGCGGA ACATTGAGCG GATCAAGCAG
TCGCAGACGT ACATTGCTGA TATGCAGCTG ATCACTGAGA AAACTGATAA GATCTATAAC
CTCGGTTTCT CCCCTGTCGT CATGCAGATC GACAAACCGG GCATCATGGT CAGCTTTCAT
GATATCACCG CACGGCGAAA AGCGGAGACC GCGTTGAAGG ACTCGGAGCG GAAGATCGAA
ACCCTCTTCG AAACGGTCCC GAGCGGGATT ATCATGTTCA CCGCCGACGG GGTGATTGTG
AACGCCAACC CAGCAGCCCT GCAGATCTTT GCTCTGCAGA ACTTCGAAGA ACTGAGCACT
GTGAACGCTT TCGATCTCAC CTGTGCCCCG GGGAGGCTGC AGTCACTGAT TCAGAAAGGA
CGAGTGGACG AGACCGAACT CGCGTGCGAC TTCGACCGCA TGAAGCGAGA GCAGGGGATC
TTGAGCACGA AATCCGGCGT GGCTTGCTTC AACGTAGTCT TCACACCGAT CCGCCCGGAC
AATGGCGGCC AACCGACCGA GTTCGCGATC CTCTTCAAGG ACATCACCCG GGACCGGCAG
GAACGAAAGG AACTGACCTC CAGGGAGACC CGGTATCACT CGTTCTTCGA AAACTCCTTC
AACGGCGTAA TCATCTATGA GCCGTTCGAT GGGGGGTCTG ACTACACCTT CAAGGACCTC
AACCGGGCGG CAGAAAAAAT CCTCCGTGTA CCGAAGGCAG ATCTGGTCGG CCGGAACGCC
ACTGAGGTGT TCCCCGATCT CGATGTCCCT GTGATCCGTG AGGCCGTGGC GCGAGTTATG
ACTACGGAGA ACCCGGAGTT CCTCCCTCCC CTCCATTACT GGAGGGGCCA GGGTGCCTGG
ATCCTGCACT ACCTCTTCAA ACTCCCCTCA GACGAGCTCG TCTCCCTCAT GGTCGACGTC
TCTGAAGAAC TCCGTGAGGA TCGCGACGAT ATCTGA
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| Protein sequence | MDTTEMYQER FKRIIELLEQ HASTGLTITA VAQNLAIPRN SASKYLALLA SKGDVSVEQF
GQKKFYRPMP RVPLLDIFDR LPYAIVILDA DLQVRMVNMS FVTELGILPG RNIIGIPLFD
LDLPIFAEPV VQRNIERIKQ SQTYIADMQL ITEKTDKIYN LGFSPVVMQI DKPGIMVSFH
DITARRKAET ALKDSERKIE TLFETVPSGI IMFTADGVIV NANPAALQIF ALQNFEELST
VNAFDLTCAP GRLQSLIQKG RVDETELACD FDRMKREQGI LSTKSGVACF NVVFTPIRPD
NGGQPTEFAI LFKDITRDRQ ERKELTSRET RYHSFFENSF NGVIIYEPFD GGSDYTFKDL
NRAAEKILRV PKADLVGRNA TEVFPDLDVP VIREAVARVM TTENPEFLPP LHYWRGQGAW
ILHYLFKLPS DELVSLMVDV SEELREDRDD I
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