Gene Mpal_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1395 
Symbol 
ID7270000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1441664 
End bp1442839 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID643570026 
ProductNHL repeat containing protein 
Protein accessionYP_002466448 
Protein GI219852016 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.597363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA TCACTATCAT CGGTATTTTA CTGGTCCTGA TGGCGGGCAT TCAAGCCGTC 
GCAGCGGCCG AAACGTACGT CTATGCGGCG CAGTGGGGTA AGGCCGGCGG CGGTTCCGGC
ACCGGGAACG GGGAGTTCAA TCAGCCGGCC CGGATTTCGT TCGACACCCA CGGCAGCGTC
TTTGTGGATG ACATGAACAA CCACCGGATC CAGAAGTTCA CTACCGTGGG CGGCTTCATC
ACCGCGTGGG GGAGCAAAGG CGTGGCTGAC CCGCCGTCCG CAGCCGGGAC GTTCCTGTCC
CCGCTGGGTG TTGCGGTGGA TAGCCAGGAT TACCTGTATG TCGCCGATCG CGACATCCAC
CGGATCCAGG TCATGGACCC CTCCCGGATC TGGACCGTCT TCGGGCCCAA CGGGACCGGA
GAACTTCTTC AGCCGAGCGA CATCGCGGTG GACAGTTTCG ATAACGTCTA TGTGGTCGAC
TGGGGGCACA ACCGCATCCG CAAGTTCGAC CTCCAGGGGA CCCCGCTCGG CGAGTGGGGC
ACCCTCGGAT CGGGAAACCT GCAGTTTAAT GGGCCCCGCG GCATCGCCAT CGACAACGCC
GACAACGTCT ATGTGGCCGA CACCGGCAAT AACCGGATCG AGAAGTTCGA CAGCAACGGC
GCTTACCTCG CAACGATCGG CACGTCAGGC ACGGGCAACG GGCAGCTCTC CGGGCCATGG
GGCGTGGACG TGGACACCGC CGGCAATGTC TACGTGGCCG ACACCGGCAA TAACCGGGTC
GAGAAGTTCA ACCGGAGCGG TGCCTTCCTC GCGACGATCG GCACGTCAGG CACGGGCAAC
GGGCAGTTTT CGATGCCTTA CGACGTCTCG GTGAACAGTG TCGGGATGGT CTACGTGGCC
GACACCGGCA ACAATCGTAT TCAGTTCTTT TTACCGAAGA CCGTGAATAC AACGCCCCTG
CTCGTGCCGG GCGGTGTCGG GGTGCCGACG GACACCAACG GTGACGGCCG CTATGATGAT
GTCGACGGCA ACCGGGTGCT CGACTTCAAC GACGTGGCCC TCTACTTCAA CCAGATGGAC
TGGATCGCCG CGAACGAGCC CCTGGCCGCG TTCGACTACA ACGGGAACGG ACAGATCGAT
TTCAATGATG TGGTCTGGCT CTTCAACCAG ATCTAA
 
Protein sequence
MKLITIIGIL LVLMAGIQAV AAAETYVYAA QWGKAGGGSG TGNGEFNQPA RISFDTHGSV 
FVDDMNNHRI QKFTTVGGFI TAWGSKGVAD PPSAAGTFLS PLGVAVDSQD YLYVADRDIH
RIQVMDPSRI WTVFGPNGTG ELLQPSDIAV DSFDNVYVVD WGHNRIRKFD LQGTPLGEWG
TLGSGNLQFN GPRGIAIDNA DNVYVADTGN NRIEKFDSNG AYLATIGTSG TGNGQLSGPW
GVDVDTAGNV YVADTGNNRV EKFNRSGAFL ATIGTSGTGN GQFSMPYDVS VNSVGMVYVA
DTGNNRIQFF LPKTVNTTPL LVPGGVGVPT DTNGDGRYDD VDGNRVLDFN DVALYFNQMD
WIAANEPLAA FDYNGNGQID FNDVVWLFNQ I