Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1395 |
Symbol | |
ID | 7270000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1441664 |
End bp | 1442839 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643570026 |
Product | NHL repeat containing protein |
Protein accession | YP_002466448 |
Protein GI | 219852016 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.597363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA TCACTATCAT CGGTATTTTA CTGGTCCTGA TGGCGGGCAT TCAAGCCGTC GCAGCGGCCG AAACGTACGT CTATGCGGCG CAGTGGGGTA AGGCCGGCGG CGGTTCCGGC ACCGGGAACG GGGAGTTCAA TCAGCCGGCC CGGATTTCGT TCGACACCCA CGGCAGCGTC TTTGTGGATG ACATGAACAA CCACCGGATC CAGAAGTTCA CTACCGTGGG CGGCTTCATC ACCGCGTGGG GGAGCAAAGG CGTGGCTGAC CCGCCGTCCG CAGCCGGGAC GTTCCTGTCC CCGCTGGGTG TTGCGGTGGA TAGCCAGGAT TACCTGTATG TCGCCGATCG CGACATCCAC CGGATCCAGG TCATGGACCC CTCCCGGATC TGGACCGTCT TCGGGCCCAA CGGGACCGGA GAACTTCTTC AGCCGAGCGA CATCGCGGTG GACAGTTTCG ATAACGTCTA TGTGGTCGAC TGGGGGCACA ACCGCATCCG CAAGTTCGAC CTCCAGGGGA CCCCGCTCGG CGAGTGGGGC ACCCTCGGAT CGGGAAACCT GCAGTTTAAT GGGCCCCGCG GCATCGCCAT CGACAACGCC GACAACGTCT ATGTGGCCGA CACCGGCAAT AACCGGATCG AGAAGTTCGA CAGCAACGGC GCTTACCTCG CAACGATCGG CACGTCAGGC ACGGGCAACG GGCAGCTCTC CGGGCCATGG GGCGTGGACG TGGACACCGC CGGCAATGTC TACGTGGCCG ACACCGGCAA TAACCGGGTC GAGAAGTTCA ACCGGAGCGG TGCCTTCCTC GCGACGATCG GCACGTCAGG CACGGGCAAC GGGCAGTTTT CGATGCCTTA CGACGTCTCG GTGAACAGTG TCGGGATGGT CTACGTGGCC GACACCGGCA ACAATCGTAT TCAGTTCTTT TTACCGAAGA CCGTGAATAC AACGCCCCTG CTCGTGCCGG GCGGTGTCGG GGTGCCGACG GACACCAACG GTGACGGCCG CTATGATGAT GTCGACGGCA ACCGGGTGCT CGACTTCAAC GACGTGGCCC TCTACTTCAA CCAGATGGAC TGGATCGCCG CGAACGAGCC CCTGGCCGCG TTCGACTACA ACGGGAACGG ACAGATCGAT TTCAATGATG TGGTCTGGCT CTTCAACCAG ATCTAA
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Protein sequence | MKLITIIGIL LVLMAGIQAV AAAETYVYAA QWGKAGGGSG TGNGEFNQPA RISFDTHGSV FVDDMNNHRI QKFTTVGGFI TAWGSKGVAD PPSAAGTFLS PLGVAVDSQD YLYVADRDIH RIQVMDPSRI WTVFGPNGTG ELLQPSDIAV DSFDNVYVVD WGHNRIRKFD LQGTPLGEWG TLGSGNLQFN GPRGIAIDNA DNVYVADTGN NRIEKFDSNG AYLATIGTSG TGNGQLSGPW GVDVDTAGNV YVADTGNNRV EKFNRSGAFL ATIGTSGTGN GQFSMPYDVS VNSVGMVYVA DTGNNRIQFF LPKTVNTTPL LVPGGVGVPT DTNGDGRYDD VDGNRVLDFN DVALYFNQMD WIAANEPLAA FDYNGNGQID FNDVVWLFNQ I
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