| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1345 |
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| Symbol | |
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| ID | 7269950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1390762 |
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| End bp | 1392792 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643569979 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_002466401 |
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| Protein GI | 219851969 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.871064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTT CGTATTTTTT GTATATATTC TGTATTCTAC TCCTGTGTTG CAGCGTCCAG
GTCGTCTGGG CCGAAGGGGG GTATGTGTAC ACCACACAAT GGGGCAGTTC TGGTTCAGGA
GACGGGCAGT TCAACCAGCC ATCTGGAGTC GCAGTGGACA GCGACGGAAA CATATACGTT
GTCGATACGA ATAACTTCCG GATCCAGAAA TTCAATGCAA CCGGCGGATT CACCACACAA
TGGGGCGGTT CTGGCCCGGG AGACGGACAA TTCAATAATC CTGAAGGTGT TGCAGTGGAC
AACAACGGCA ACGTCTATAT CGCCGACAGG GATAACAACC GGATCCAGAA GTTCAATTCG
TCCGGGGGAT TCCTCATGAA ATGGGGCAGT ATTGGTTCGG GAGACGGGCA GTTCAACCAG
CCATCTGGTG TCGCGCTGGA TAGTGCTGGC AATGTCTACG TGACCGACAA GCAGAACAAC
CGGATCCAGA AGTTCAATTC GTCCGGGGGA TTCCTCATGA AATGGGGCAG TGAAGGCTCA
GGAGACGGGC AGGTCCACTG GCCATCTGGT GTCGCGGTGG ACAACACAGG AAGCGTCTAC
GTAGTCGACT CGTATAACCA CCGGATCCAG AAGTTCAATG CAACCGGTGG ATTCATCACA
AAATGGGGCA GTGAAGGCAC AGGAGACGGG CAGTTCAAGA GTCCAACAGG TGTCGCAGTG
GACAGCGTCA ATAACGTCTA CGTGGTCGAC ACGGGGAACG ATCGAATTCA GAAATTCAAT
TCGTCCGGTG GATTCATCAC CACAGGGGGC AGTTTTGGCC ATGGGGACGG GCAGTTCTGG
TCTCCAGAGG GGATCACGGC GGACAGTGCC AATAACGTCT ACGTGGTCGA CACCTTGAAC
GATCGGATCC AGAAGTTCAA TGCAACCGGC GGATTCATCA CAAAATGGGG GAGCGCTCTT
GGCTCGTTTG ACGGGCAGTT CAGCGGATTA TCTGATGTCG CAGTGGACAG CACCGGCAAC
GTCTACGTGG CTGAATCAGG AAACTGCCGG ATCCAGAAGT TCAATGCAAC CGGCGGATTC
ATCACAAAAT GGGGCAGTGA AGGCTCAGGA GACGGACAGT TCAACGGGCC AACTGGTATC
GCGGTGGATA GCGCCGACAA TGTCTACGTG GTCGAAATAT GGAACTGCCG AATCCAGAAG
TTCAATTCGA CTGGCGGATT CCTCATGAAA TGGGGCAGTT ATGGTTCAGG AGACGGGCAA
TTCAACAAGC CATCTGGTAT CGCAGTGGAC AGTGCCGGCA ATATCTACGT CACCGATGCG
AATAAATGCC AGGTCCAGAA GTTCGATCAA AACGGCACAT TCGTCACGCA ATGGGGCAGT
TTCGGCACGG GGGACGAGCA GTTCTTCTAT CCCAATGACA TCACAGTGGA CAACGCAGGG
AATGTCTACG TGGTCGACTC AGATAACCCC CGAATCCAGA AGTTCAATTC GACTGGCGGA
TTCATCACAA AATGGGACAG TTTTAGCACG GGGAACGGGC AGTTCAACCG GCCATGTGGT
GTCGCAGTGG ACAGCGCGGG AAACGTTTAT GTGACCTGCT TCCAGATTTT GTACACCTGT
GGTCCTCCCG AGTTGATTCA ATCCCGGGTC CAGAAGTTCA CGCCGAATGG CACGTTCATC
ACGGAATGGG GCAGTCTGGG GTCAGGGGAT GGGCAGTTCA ACCGGCCATC TGGTGTCGCG
GTGGACAGCG CAGGAAACGT CTACGTCGCT GACTCGGGGA ACAACCGGAT CCAGAAGTTT
GCCCTGGTCA TCACGCCGGT ACCCCCATCC GGAAACACTC CCCTGGACCT CAACCATGAC
GGACTCTATG AGGACATCAA TGGCGACGGG ATCGCAGACT TCAATGACGT GGTCCTCTTC
TTCAACCAGA TGGACTGGAT CGCCGAGAAC GAACCGATCA GTGCCTTCGA CTTCAACAGG
AACGGCCAAA TCGATTTCAA TGATATCGTC ATGCTCTTCA ACGAACAGTA G
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| Protein sequence | MRSSYFLYIF CILLLCCSVQ VVWAEGGYVY TTQWGSSGSG DGQFNQPSGV AVDSDGNIYV
VDTNNFRIQK FNATGGFTTQ WGGSGPGDGQ FNNPEGVAVD NNGNVYIADR DNNRIQKFNS
SGGFLMKWGS IGSGDGQFNQ PSGVALDSAG NVYVTDKQNN RIQKFNSSGG FLMKWGSEGS
GDGQVHWPSG VAVDNTGSVY VVDSYNHRIQ KFNATGGFIT KWGSEGTGDG QFKSPTGVAV
DSVNNVYVVD TGNDRIQKFN SSGGFITTGG SFGHGDGQFW SPEGITADSA NNVYVVDTLN
DRIQKFNATG GFITKWGSAL GSFDGQFSGL SDVAVDSTGN VYVAESGNCR IQKFNATGGF
ITKWGSEGSG DGQFNGPTGI AVDSADNVYV VEIWNCRIQK FNSTGGFLMK WGSYGSGDGQ
FNKPSGIAVD SAGNIYVTDA NKCQVQKFDQ NGTFVTQWGS FGTGDEQFFY PNDITVDNAG
NVYVVDSDNP RIQKFNSTGG FITKWDSFST GNGQFNRPCG VAVDSAGNVY VTCFQILYTC
GPPELIQSRV QKFTPNGTFI TEWGSLGSGD GQFNRPSGVA VDSAGNVYVA DSGNNRIQKF
ALVITPVPPS GNTPLDLNHD GLYEDINGDG IADFNDVVLF FNQMDWIAEN EPISAFDFNR
NGQIDFNDIV MLFNEQ
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