| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1336 |
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| Symbol | |
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| ID | 7271197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1377988 |
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| End bp | 1379691 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643569970 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002466392 |
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| Protein GI | 219851960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC ATCTCTTAAT ACTCACCCTG ATTACCGCAA TCCTGCTGAT TGGATTGGTC
GGATCAGTCA GTGCTGCAAG AACGCCCGTT GCTCAATTCA CGGCCAGTTC TATCATCGGG
ACAGCCCCAT TGACAGTTCA TTTCACTGAC CTGTCAACCG GAAATCCAAC TGCATATGCC
TGGAAGTTCG GCGATGGAAC CACATCGAGT ACAAAAAACC CAACGCATGT CTACAAGACC
GCAGGTAAGT ACACCGTCAC TGAGACTGTC CAGAATCGTG CTGGGTCAAC CACCATCGTA
AAGACTGGAT ATATCACCGT TGTAACACCC AAAACAACAG TTGTTCCAAC CACGGTAGCT
ACACCCGTTC CAACTGCAAT CCCAACCACG GTCGCCACAC CCGTTCCAAC TGCAATCCCA
ACCACGGTAG CTACACCCGT TCCAACTGCA ATCCCAACCA CGGTAGCCAC GATTGGCCCT
GTCACCAGTG CCATTGAGGC ATCAGCATAT GCGAATGCCG CCTACACTCA GGGGAATGCC
CGCCTTGCGC AGATGCAGCA GGCCTATCAG GCATGGGTTG TTCCCTCTCG ACCGGACCTC
GTTAAGATTG CCACGAATGC CAGAACATCA GGGCTGAAAG GCGATGGTGT CACCGATGAT
ACTGCTGCCC TCCAGTCGCT CCTCACCAAC CTCCCATCCG GGTCGACGAT CTACTTCCCT
CCCGGTCATT ACCGGATCGA TGGACCCATC AGCATCAACA AGCCCTTCAC CCTGTTCGGT
GAATCGGGAA CCGTGTTCGA CTGTGAAAAA GCGACACAGT ATGTCTTCAC CCTGAATGCC
AAAGGCACGT CCGCTTCGCC GATGACGGGC ATGACCATCA CCGGAATCGT CTTTGAAGGT
CCCGGGATTG AAACCAACCC GGCGATGATT GATGCATATT ATCTCCAGAA CTTCCATGTA
TCCTATGTAA AGTTCCATAA TATCGGGTAT GCAGCAATCC GAGTGAACAC CTGCACCGAT
GTCACGATTG AAAAGTCAAT CTTCGATAAT GTGTTCCAGA CCGGACTGGG ATATGGGGTC
AGCATCACCG ACCACAGCGA TCTGATCTCT ATTCACGACA ACTTCTTTGT CACCAAGGGA
AGGCACAGTG TCACAACCGG AACCAGTCAA ACCGACCTGC CGGTGGCATC TTATGTTCAG
AGAGTCACTG TCGAGAACAA TTATTTCGAG AACACAACAG AGGGGGCAAT CGATGCCCAT
AAACCGACCA CTGGACCCTA TGTCATAAGG GGTAATGTCA TGAACAACTG TGTCAAGGGG
GTAGAACTCG GCAGTGGTAC GGCACAGATC AGCGACAATG TGATCGTAAA CTGCAAAGGT
GGCGTTGTAT TAACGAACGC ATACGCCGAC CCAAATAATC TGCCAGCCAA AGTTGATCAG
ATTGTTGACA ATACCATGAT CAATATCCTC TATGAAGCCA TAGATGTCGA CCGGACCAAT
GTCCTCATTC AGGGGAATGT TGCGAAAGGC ACGGGTAACG GCGGGACTGG GATCTACCTC
GAACCCTATG TCCCGAACGT CTGCAATATC GACGGGAATG TAATTGATAG TTACGCTCGC
GGATTCCAGG CAAGTACGCC CAGCTCAACA ATTTCACTGG TGAACAACTT CCTCAAGAGC
AGTGGAAGTT ATATTAATTT CTAA
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| Protein sequence | MKKHLLILTL ITAILLIGLV GSVSAARTPV AQFTASSIIG TAPLTVHFTD LSTGNPTAYA
WKFGDGTTSS TKNPTHVYKT AGKYTVTETV QNRAGSTTIV KTGYITVVTP KTTVVPTTVA
TPVPTAIPTT VATPVPTAIP TTVATPVPTA IPTTVATIGP VTSAIEASAY ANAAYTQGNA
RLAQMQQAYQ AWVVPSRPDL VKIATNARTS GLKGDGVTDD TAALQSLLTN LPSGSTIYFP
PGHYRIDGPI SINKPFTLFG ESGTVFDCEK ATQYVFTLNA KGTSASPMTG MTITGIVFEG
PGIETNPAMI DAYYLQNFHV SYVKFHNIGY AAIRVNTCTD VTIEKSIFDN VFQTGLGYGV
SITDHSDLIS IHDNFFVTKG RHSVTTGTSQ TDLPVASYVQ RVTVENNYFE NTTEGAIDAH
KPTTGPYVIR GNVMNNCVKG VELGSGTAQI SDNVIVNCKG GVVLTNAYAD PNNLPAKVDQ
IVDNTMINIL YEAIDVDRTN VLIQGNVAKG TGNGGTGIYL EPYVPNVCNI DGNVIDSYAR
GFQASTPSST ISLVNNFLKS SGSYINF
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