| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1323 |
|---|
| Symbol | |
|---|
| ID | 7271184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1358024 |
|---|
| End bp | 1359106 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643569957 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002466379 |
|---|
| Protein GI | 219851947 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAC ATTGGCGGCG GATCCAGGCG GCACGTAACA CCTATGCGAT ACTGGCAGCG
GCCTGCGAAC AGGCCGGGTT CACCATGGAC CTGGTGGATC GGCCGATCCC GGATGTGACC
TGCTACAGCC TGAACTCCCT CTCTGCGCCG GCTCTGAAAG AAGAGATCCG GACGGCCCCC
TGCATCACCA TCGCCGGCGG GCCCTATGCA ACGGCCTGCT ATCAGGAGGC GGCGACCTGG
GCTGATTACG TGGTGGTGGG CGAGGGGGAA CATACCCTGC CTTCCCTCCT TGCTGCCATC
GAGGAAGGGG ACGGGAGGAT CCCGTCGGGG GTCGCAACCA GCGATGAGTA TACGCCGGCC
CGGTCCAGTG TGGTGCTGGA CGCATTCCCA CCGTTCTCGC AGGTGAAGGG ATATATCGAG
ATCAGCCGTG GATGTCCGCA TCGGTGCGGA TACTGTCAGA CCCCCCAGAT CTTCGGCCAC
TGCATGCGTC ATCGTTCGAT CGAGGCGGTG GTCCGGGCGG CCGAGCGGTG CCGGGATGTG
CGGTGTGTCA CCCCGAACGC CCTGGCCTAC GGTTCAGACG GCATCCATCC CCGGCTTGAT
AAGGTCGAGC ACCTGCTTAG AAGGCTCTCC GGAGCGGTCT ACATCGGGAC GTTCCCCAGC
GAGGTCAGGC CGGAGTTCAT CACCCCAGAG GCTCTCGACC TGATCTGTAC CTACTGCAGC
AATACCCGCC TCCACTTCGG AGCACAGTCC GGGAGCGACC GTGTGCTGAC CGCACTCGGA
CGGGGGCACA CGGTGTCGGC CGTCGAGGAG GCGGTCGACC TCTGCAGGGA GGCAGGGATC
ACCCCGGTGG TGGACATGAT CGTGGGGTTG CCCTGCGACG ATGACGAGAG TGAGCGGGCG
ACTGGAAAAC TCATTCGCTG GGTTGCAGAT AGGGGAATCG TCCATGCTCA TCAGTTTATG
CCGCTTCCGG CCACTCGGCT TGCAAATTCG GCTCCCCGGC CGTTATTGCC CGAGACCGTC
CACATGCTCG GCCACCTCTC TTTGACCGGA AAACTGACTG GATCTTGGCG GATCCGACAT
TAA
|
|---|
| Protein sequence | MQVHWRRIQA ARNTYAILAA ACEQAGFTMD LVDRPIPDVT CYSLNSLSAP ALKEEIRTAP
CITIAGGPYA TACYQEAATW ADYVVVGEGE HTLPSLLAAI EEGDGRIPSG VATSDEYTPA
RSSVVLDAFP PFSQVKGYIE ISRGCPHRCG YCQTPQIFGH CMRHRSIEAV VRAAERCRDV
RCVTPNALAY GSDGIHPRLD KVEHLLRRLS GAVYIGTFPS EVRPEFITPE ALDLICTYCS
NTRLHFGAQS GSDRVLTALG RGHTVSAVEE AVDLCREAGI TPVVDMIVGL PCDDDESERA
TGKLIRWVAD RGIVHAHQFM PLPATRLANS APRPLLPETV HMLGHLSLTG KLTGSWRIRH
|
|---|
| |