| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1157 |
|---|
| Symbol | |
|---|
| ID | 7270421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1187105 |
|---|
| End bp | 1188085 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643569790 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_002466223 |
|---|
| Protein GI | 219851791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATT ATGACAATAT TTTAGAATTG ATCGGGAATA CGCCGCTTGT TCGGATCAGG
AATGTGATGC CGGCAGGAAC ACGTCCGCTG GTGCTTGGAA AAGTCGAGAG CCTCAACCCC
GGGGGGAGTG TCAAGGACAG GATTGCCGCC AATATGGTCT TTGAGGCGGA ACGAACCGGG
CAGATCCATC CAGGGGGAAC GATCGTCGAA CCCACGTCAG GAAATACCGG GGTGGGGTTA
GCGATTGCTG CTGCTTCACG CGGGTACCGG GCGATCTTTA CCCTGCCAGA TAAGATGAGC
AAAGACAAGG AGATTCTGTT GCAGGTGTAC GGCGCCGAGG TGATCAGGAC GCCGACCAAC
GTGCCTCCTG AAGATGAACG CAGTTATTAC AAGGTTGCTG AGAGAGTGGG GCGTGAAACA
CCGGGATCGT TCCTTCCAAA CCAGTTTGAG AATATCAACA ACCCTGCTGC GCATTATGCC
ACAACCGGTC CTGAGATCTG GAAGGATACC GACGGGCGTA TCACCCATTT TATAGCCGGT
ATCGGGACAG GAGGCACCAT ATCTGGAATC GGGCGCTATC TCAAGGAGAA AAATCCGGAT
ATAAAGATCA TCGGGGTCGA CCCCGAAGGC TCCATTTACC ATCACGTTTT TTACGGGACC
GAGCCGGAAT CCCACCCCTA CAAAGTTGAA GGGACCGGGG AGGAGTTCAT CCCGAAGACC
GTGGACCTGA CCGTGATCGA TGATGTGATC GTGGTTGAGG ATAAAGATGC ATTTGAGATG
ACCAGAAGGC TGGCTCGCGA GGAGGGGCTG CTGGTCGGCG GGACGGCCGG AGCTTCCATG
GTTGCGGCAG CTTCTGTTGC ACAGAATCTT TCAGAAGATG ATCTCCTGGT GGTGCTGCTC
CCGGATACCG GACGCAATTA CATGACTACG ATCTTCAACG ATGATTGGAT GAGAGAGAAT
GGATTTTTGG ATGTGATTTA A
|
|---|
| Protein sequence | MRYYDNILEL IGNTPLVRIR NVMPAGTRPL VLGKVESLNP GGSVKDRIAA NMVFEAERTG
QIHPGGTIVE PTSGNTGVGL AIAAASRGYR AIFTLPDKMS KDKEILLQVY GAEVIRTPTN
VPPEDERSYY KVAERVGRET PGSFLPNQFE NINNPAAHYA TTGPEIWKDT DGRITHFIAG
IGTGGTISGI GRYLKEKNPD IKIIGVDPEG SIYHHVFYGT EPESHPYKVE GTGEEFIPKT
VDLTVIDDVI VVEDKDAFEM TRRLAREEGL LVGGTAGASM VAAASVAQNL SEDDLLVVLL
PDTGRNYMTT IFNDDWMREN GFLDVI
|
|---|
| |