| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1079 |
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| Symbol | |
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| ID | 7270995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1117991 |
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| End bp | 1119142 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643569714 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_002466148 |
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| Protein GI | 219851716 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.470158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.312706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGTCC TGAAACTGGA CAGTGGGTAT AATATCGGTG TGCCACCAGC GTCCTGCCAG
ATGCTTGAGC CGGCCACGTC CATCGAACAA CCCGAACAGA TCCTGGTCGA CCAGGACAGG
TCGCTGCCAC ACCTCTCGAT CGTCTCCACT GGGGGGACAA TCGCCAGCAA GATCGATTAC
CGGACCGGGG CCGTGACCAG TCAGTTCACG GCCGCCGAGT TGATGCGGGC GATCCCGGGG
CTCGGCTCGA TCGGACAGTA CCGGACGGTG CAGCTCGCCT CGATCCTCTC TGAGAACATG
ACTCCCTCGC TCTGGCAGGA ACTGGCCCGG GCTATCTATC AGGAGATCAA GGACGGGGCA
GAGGGGGTGA TCGTCACCCA CGGAACCGAC ACGATGGCCT ACTCTGCGGC AGCAGTCAGT
TTCATGCTTA AAACCCCGGT ACCGGTCGTC TTCGTCGGCT CGCAGCGGTC TGCCGACCGC
CCGAGCAGTG ACAATCTGAT GAACGGACTC TGCAGTGCCA GGGCCGCGGT CAGCGATCTC
GGCGAGGTGG CGGTCGTGAT GCACCAGACC AGTTCGGACG ACTTCTGTGC GATCCACCGG
GCGACACGGG TGCGCAAGAT GCACACATCC AGGCGGGACG CATTCCAGTC GATCGGCAGT
TCTCCGATCG GGACCATCGC ATACCCGTCC CTCGAGGTAA ACCTGACCGC CGACGCGGTC
CGGCGACAGC CGATCGAGCC GGAGCTCGCT GACCGGCTGG AGGAACGATG CGGGCTGCTC
CAGTTCGTTC CCGGCCTCTC CCCGGACATT CTGGCGGCAT ATGATGGTTA CCGGGGGCTG
GTTCTCTCAG GGACCGGCCT CGGGCATGTC TCGACCACCT GGTTCCGGCA GCTCGGTTCG
ATGATCGAGG ACGGGACCAC CATCGTGATG ACCTCGCAGT GTCTGTCCGG TCGGGTCTGC
GATCGGGTTT ATGATACCGG TCGGGACCTG CTGAAGATCG GTGTGGTCGA GGGGGGGACG
CTCCTCCCCG AGGTGGCGCT GGTGAAACTG ATGTGGGTGC TCGGACAGGA GAAGGATGAG
GAGAAGGCGA GGATGATGAT GACTATGGAT CTGCGTGGCG AGGCGCCAGG GAGGTCTGCA
CATGGATTAT AA
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| Protein sequence | MRVLKLDSGY NIGVPPASCQ MLEPATSIEQ PEQILVDQDR SLPHLSIVST GGTIASKIDY
RTGAVTSQFT AAELMRAIPG LGSIGQYRTV QLASILSENM TPSLWQELAR AIYQEIKDGA
EGVIVTHGTD TMAYSAAAVS FMLKTPVPVV FVGSQRSADR PSSDNLMNGL CSARAAVSDL
GEVAVVMHQT SSDDFCAIHR ATRVRKMHTS RRDAFQSIGS SPIGTIAYPS LEVNLTADAV
RRQPIEPELA DRLEERCGLL QFVPGLSPDI LAAYDGYRGL VLSGTGLGHV STTWFRQLGS
MIEDGTTIVM TSQCLSGRVC DRVYDTGRDL LKIGVVEGGT LLPEVALVKL MWVLGQEKDE
EKARMMMTMD LRGEAPGRSA HGL
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