| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1056 |
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| Symbol | |
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| ID | 7270972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1087320 |
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| End bp | 1089590 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569692 |
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| Product | efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family |
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| Protein accession | YP_002466126 |
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| Protein GI | 219851694 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0557741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.21545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATCAC CATTTGAGAT GCTCGCCAAC GCCATCGTGG CACGGCCAAA GACCGTGCTC
GCGATCACGG TAGTGCTGAT CATTGTTGCT CTGGTCGGGG CGACGACGGT CACAATGGCG
ACCGGGAGTG ACACCTACAT TGATAAGGAC TCTCAACGTG GCGTCCTTCT CAACGAGTAC
ACCGATACGT TCTCATCCAA CAGTATCATG TTGTTGGTCG AGTCTGACGA CGTGCTCAGT
CCGGATGTAC TCAAGTATAT CGATTCACTC CAGAACGAGG TTCGTGGAGA ACGAAATGTT
GAAGGAGTGA CCAGTATTGT CGATCTGGTC GAGCAGGTGA ACGGCGGCAA AGTGCCGACA
TCGAAGGCGG ATATCGAGGC AGCCGAAGCA GCAGTGCCAG CGGCGATCCT CTCGAAATAT
GTTCCGTCAA AGTCAATGAC AATCTCGATC GTGAGCCTGG AGCCAGGCCT TTCCCAGGCC
AGTCAGAACA GTGTGATCGA CAGTCTGAAC AAAAGGATCA GTCTCTCTGA CAGGCCGGCC
GGCACGACCG TGACGGTCAC CGGGTCACCG GCATTCCAGA AGGATATGTC AACAGCGATG
GGAACCTCAA TGGGGATGTT GATTGGGGCC GCGATGCTGT TAATGATCCT GGCGGTCGGA
CTGCTCTTCG GGCATGTCAG GTACCGACTC CTCTCAGTGG CAATCGTCTT CTCCGGACTG
ATCCTGACAT TCGGGGTCGT CGGTTTCTCG GGGATTTCCC TGAGCATGGT CGCGATCAGT
GCGTTCCCAG TGTTGATAGG GCTCGGGATC GACTATGCGA TTCAGGTCCA CTCCCGGTTT
GATGAAGAGA CGCGGCGGGG GACGCTCCCG GAGGCGGTGG TTATGACGAT CACCCGGTCA
GGCCCTTCGA TCCTCTATGC GATGCTCGCC ACCTCGATGG GGTTCTTCGC CATGTTCATC
TCACCCCTCC CGATGATTCG GGGGTTCGGG CTGATCTGTG TGATTGGAAT CGTATGCTGC
TACCTGGTGG CCCTGATCGC AGTACCCACG TTCGGCTTGC TGATCGGGTA TAAACCCAAA
GAGAGGGCTC ATGAAGTGAA GAGTACCTCA TCAAAACCGA AGAAGATGAG CGTTGTCGAC
AGGTATGATC ACGCGCTTGT GAGCCTGGTG ACGAAGATTG CCCATAACCC GGTGCCGATC
CTGTTAATCT GCGGGCTGGT CGCACTGGTC GGGTTCGAGA TGGACGGTGA GATCAAGATC
AACACCGATG AAAACTCGTT CGTTCCCTCA GATATGGCAT CCAAGATCAG CCTCGACAAG
GTCTCACGGA CGATGGGGTC GACCTCTTCG ATCCCGATCA TGGTGCAGGG GGACAAGGTG
ACCAGCCCTG AAGTGATCAA ATGGATGTAT GACTTCCAGA ACTATGCCGC GTCCAGTAAT
AGTCAGGTGA CCGGTTCATC GTCGATTGCA ACCTATGTGG TCCAGTACAA CGGTGGGCAG
ATCCCAACCA CCCAGGAAGA GGTGGATAAT GCCCTGGCCA AGGTACCCCT GGGAACCAGA
AACCAGTATC TGAGCGGCAA CGAGGAGGCG GTCATCTCGT TCACAACCGT GACGATGACG
GTCCAGCAGG CACAGTCGCT GATCACCCAG ATGAAACAGG AACTGCAATT CAAGACCCTT
CCACCCGGTA TCTCCGCTGG ATTGACCGGT CAGACCGAGA TGTTCGCCGG CCTGATAGAG
GATATCAAGA ACGGGAAGAT GACGATGACG CTGCTCGGGT TCGGCATGAT CTTCGGGTTC
CTGCTACTGG TGTACCGCAA GTTCGCCAAG GCGATCACAC CGCTGATCCC GATCATGTTT
ATCGTCGGCT GGAACGGGCT GATCATGTAT TCCCTCGGGA TCGACTACTC GCCTCTGACC
GCAGTGCTCG GATCGATGAC CATCGGAGTC GCCGCAGAGT ATACGATCCT GATGATGGAG
CGGTACTACG AGGAGCGGAC CTGGGGGCTC GGGCATCTGG AGGCCATCAC CCACTCGATG
AAGCAGATCG GAACCGCGAT CACCGTCTCG GGGCTCTGCA CGGTCTTTGG GTTCTCAGCG
CTGATCATCT CCAACTTCAA TATCATCAGC AACTTCGGTG TGGTGACGGT CCTCTCAGTC
GCCTTCTCAG TGATGGGCGC AATCGTAGTG ATGCCGGCCG TCCTGGCGCT GCTCGGTGGG
AAGGATCCAA GCCCGCCCCT CCATCCAGAG GCCCAGTCTG AAGAGACGTA A
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| Protein sequence | MKSPFEMLAN AIVARPKTVL AITVVLIIVA LVGATTVTMA TGSDTYIDKD SQRGVLLNEY
TDTFSSNSIM LLVESDDVLS PDVLKYIDSL QNEVRGERNV EGVTSIVDLV EQVNGGKVPT
SKADIEAAEA AVPAAILSKY VPSKSMTISI VSLEPGLSQA SQNSVIDSLN KRISLSDRPA
GTTVTVTGSP AFQKDMSTAM GTSMGMLIGA AMLLMILAVG LLFGHVRYRL LSVAIVFSGL
ILTFGVVGFS GISLSMVAIS AFPVLIGLGI DYAIQVHSRF DEETRRGTLP EAVVMTITRS
GPSILYAMLA TSMGFFAMFI SPLPMIRGFG LICVIGIVCC YLVALIAVPT FGLLIGYKPK
ERAHEVKSTS SKPKKMSVVD RYDHALVSLV TKIAHNPVPI LLICGLVALV GFEMDGEIKI
NTDENSFVPS DMASKISLDK VSRTMGSTSS IPIMVQGDKV TSPEVIKWMY DFQNYAASSN
SQVTGSSSIA TYVVQYNGGQ IPTTQEEVDN ALAKVPLGTR NQYLSGNEEA VISFTTVTMT
VQQAQSLITQ MKQELQFKTL PPGISAGLTG QTEMFAGLIE DIKNGKMTMT LLGFGMIFGF
LLLVYRKFAK AITPLIPIMF IVGWNGLIMY SLGIDYSPLT AVLGSMTIGV AAEYTILMME
RYYEERTWGL GHLEAITHSM KQIGTAITVS GLCTVFGFSA LIISNFNIIS NFGVVTVLSV
AFSVMGAIVV MPAVLALLGG KDPSPPLHPE AQSEET
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