Gene Mpal_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0999 
Symbol 
ID7271732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1028553 
End bp1028870 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content62% 
IMG OID643569637 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002466072 
Protein GI219851640 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0663684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA ACCCGTTCGA ACAGTTTATG CAGGAATGCC CGACCATCGC CGGGGCTTAT 
GGCGCTCTCG TCCAGGCACA GGCCGCAACA GATGCACTCG ACCCACTGAC CAAACAGTTG
ATCAATATCG CGATTCAGAC CGCTCAGAAG AACCCGGTCG GAGTCCGGCA CCACGCCGCA
ATGGCCCGGG ATGTTGGAGC CGGCAGGGAG GCGGTGATCG CTGCCGTCGT AATGAACCTG
CATCTCTCCG GTCTTGGTCC GGTCCTTCTC TCACTCCCTG CGGCGATCGA GGGCTGGGAA
GGGACCGGTC CGTGCTGA
 
Protein sequence
MTSNPFEQFM QECPTIAGAY GALVQAQAAT DALDPLTKQL INIAIQTAQK NPVGVRHHAA 
MARDVGAGRE AVIAAVVMNL HLSGLGPVLL SLPAAIEGWE GTGPC