| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0992 |
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| Symbol | |
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| ID | 7271725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1021320 |
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| End bp | 1022027 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569631 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_002466066 |
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| Protein GI | 219851634 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0708331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAC CAGTACAGCA GACCACTATT CGGGCTGCTA TCTTCGATAT GGACAACACG
CTGTTCGATT TTATGTATGC CCAACGGGCG GGGTGCAGCG CGGTCCTTTC GGTGCTCGGT
CATCCGACTG ACCCGAGCGT GCTCTTCCGC TACTTTCTTC GCCCTGACCA TGGGTTTGAA
AGCACGCAGA ATATCCGGGA TTATCTTGTG GATCTCGGTC ATAACGATCC GAATCTCTTC
CGGATCTGTG CGGCCCAGTA TGAAGCGCGT AAACTCCAGG CGATCACTCC GTATGATGAT
GCACTGTCGA CCCTTGAAGC GCTCAGGGAT CTTGGAATCC CTCTGGCGCT GGTGACCGAC
GCCGATACCG ACCATGCCCG GGGTCGGCTC AAGCAGGCTG GTCTGGAGAG GTTCTTTCCG
GTGATCGTCA CCCCCGACCA GACCGGTTCG CGAAAGCCCT CCCACTGTCA GTTTCTGTCA
GCACTCGATC AGCTCCGGGT AACCCCGGCC GAGGCACTGA TGGTTGGGGA CAGTCTGCGC
CGGGATATCT ACCCGTGCAC CGAACTCGGG CTGATCACGG CGTACGCGGC CTATGGCGAT
CAGAGCCCGT TTCCTTCGCC GGTCTGTACC CCCGATCTGG TTCTCGAAAG ACTGGACCAG
ATCCTCGACC TCTTCCCAGC ATACTCCGGT GCTGTTCGTC AGGCATGA
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| Protein sequence | MSSPVQQTTI RAAIFDMDNT LFDFMYAQRA GCSAVLSVLG HPTDPSVLFR YFLRPDHGFE
STQNIRDYLV DLGHNDPNLF RICAAQYEAR KLQAITPYDD ALSTLEALRD LGIPLALVTD
ADTDHARGRL KQAGLERFFP VIVTPDQTGS RKPSHCQFLS ALDQLRVTPA EALMVGDSLR
RDIYPCTELG LITAYAAYGD QSPFPSPVCT PDLVLERLDQ ILDLFPAYSG AVRQA
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