Gene Mpal_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0947 
Symbol 
ID7272440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp982226 
End bp983071 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID643569586 
ProductProtein of unknown function DUF63 
Protein accessionYP_002466022 
Protein GI219851590 
COG category[S] Function unknown 
COG ID[COG1967] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGGG AGTTCATATA CAAATACTAC ATCGATCCCA TCCGGTATGG AGGGGCCTAT 
ACGATCGTCG ATACCCTGAC CTATGCCCTG ATATTGATCG TCTCCCTGTA CCTGATCTAT
CAGTGGCTGA ACAGGACCAA AATCAGCATC GATCGTTCGT TCATCTATTC GTTGCTCCCC
TTTGTGGTGC TCGGTTCATT ACTTCGGGTG ATACAGGACA CCGGGATGAT CACATCGGAT
CTCCAGTTCC TGCTCGTGAC CCCGCTGATC TTCTTCACCA TCTTCTTCTT CACGATAGCC
TGCCTCTTCG TCTCCAGGCT TGCCGAACAC TACGGGCTGC TCAAGGATTA CCATCGGGGC
TTTGCAGGGC TCGGAATCAT CGCCTGTCTG ATCAGCGGTG CGGTGCTCTG CTGGTACGGG
CTGACCGTCA CCAGGATCGA TTTCGGAGTT CTGCTGACCA TTCTCCTGAT GGCCGCCACG
ACCACGACCC TGGTCTGGGC GTTTCTCCGC TATGTGCTCA AATGGGAGTT TGCTTCGGAC
CCGATCTATG TGCTGCTCCT GCTCGGCCAC CTGCTCGACG CCAGTTCGAC CAGTTATGGC
ATCAGCCTGC ATCCCCTCCA CTACGTCGAG CAGCACGTGG TGGGTTCATC GCTGATCGCC
GCAACCGGTA CCGGTTTCGT GATGTTTCCG CTGAAGCTGG CCGTCCTGAT CCCGGGGATC
TATATTCTGG AACTCTATCG GAAGGAAGGA GCCAGTGCGT TCTGGCACCT GGTCGTCTTT
GCGATGATCG TGGTCGGACT GGCCCCCGGT CTTCGGGATA TGATCAGGAT GGTCCTCTAT
GTCTGA
 
Protein sequence
MIREFIYKYY IDPIRYGGAY TIVDTLTYAL ILIVSLYLIY QWLNRTKISI DRSFIYSLLP 
FVVLGSLLRV IQDTGMITSD LQFLLVTPLI FFTIFFFTIA CLFVSRLAEH YGLLKDYHRG
FAGLGIIACL ISGAVLCWYG LTVTRIDFGV LLTILLMAAT TTTLVWAFLR YVLKWEFASD
PIYVLLLLGH LLDASSTSYG ISLHPLHYVE QHVVGSSLIA ATGTGFVMFP LKLAVLIPGI
YILELYRKEG ASAFWHLVVF AMIVVGLAPG LRDMIRMVLY V