Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0946 |
Symbol | |
ID | 7272439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 981667 |
End bp | 982233 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569585 |
Product | protein of unknown function DUF95 transmembrane |
Protein accession | YP_002466021 |
Protein GI | 219851589 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.886954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAC GGCCCCTGAA TCGATACATC ATTTTTGCTG CTGCCCTCTT CTTCACCTCA TTCATCGTCG GCATCGTGAT GGTCAGGCTG GACCCGTCGA TCGGCACCTC CATGATTGCT GCGTTCCGCG ACCAGGTGGT TAAACAGATC ATGAACGATC AGACAGGAAT ACTCTGTTTG AAGATCCTCC TCAACAACCT GGTGGCCTGC CTGGTCCTCT TCCTCGGCGG GGTGACGGCC GGCATCATCT CACTGGTCGT GCTCGGTGCC AACGGGGTGC TGATCGGAGC GGTGCTGGAG ATGGTCAGGT CGCAGCGGGG AGTCCTGTAT GTCGCAGCGG CGATCCTTCC GCATGGGATC TTTGAGATCC CGGCGTTTCT GATCTCCGCA GCCCTCGGGT TCATGCTGGC AGGCGCCCTG GTCGGGGACT GGCACGGGAA TGAGGATGCA GGGGATACAA CCCGGCGTCT CGGACGCATT TTTCTCTCCG TCGTGGTCCC GCTGATCGTC GTCGCGGCGT TTGTAGAGGC TTTTATTACG CCTCAGATTA TACATTTAGT CAGTTAA
|
Protein sequence | MSERPLNRYI IFAAALFFTS FIVGIVMVRL DPSIGTSMIA AFRDQVVKQI MNDQTGILCL KILLNNLVAC LVLFLGGVTA GIISLVVLGA NGVLIGAVLE MVRSQRGVLY VAAAILPHGI FEIPAFLISA ALGFMLAGAL VGDWHGNEDA GDTTRRLGRI FLSVVVPLIV VAAFVEAFIT PQIIHLVS
|
| |