Gene Mpal_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0946 
Symbol 
ID7272439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp981667 
End bp982233 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content57% 
IMG OID643569585 
Productprotein of unknown function DUF95 transmembrane 
Protein accessionYP_002466021 
Protein GI219851589 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.886954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC GGCCCCTGAA TCGATACATC ATTTTTGCTG CTGCCCTCTT CTTCACCTCA 
TTCATCGTCG GCATCGTGAT GGTCAGGCTG GACCCGTCGA TCGGCACCTC CATGATTGCT
GCGTTCCGCG ACCAGGTGGT TAAACAGATC ATGAACGATC AGACAGGAAT ACTCTGTTTG
AAGATCCTCC TCAACAACCT GGTGGCCTGC CTGGTCCTCT TCCTCGGCGG GGTGACGGCC
GGCATCATCT CACTGGTCGT GCTCGGTGCC AACGGGGTGC TGATCGGAGC GGTGCTGGAG
ATGGTCAGGT CGCAGCGGGG AGTCCTGTAT GTCGCAGCGG CGATCCTTCC GCATGGGATC
TTTGAGATCC CGGCGTTTCT GATCTCCGCA GCCCTCGGGT TCATGCTGGC AGGCGCCCTG
GTCGGGGACT GGCACGGGAA TGAGGATGCA GGGGATACAA CCCGGCGTCT CGGACGCATT
TTTCTCTCCG TCGTGGTCCC GCTGATCGTC GTCGCGGCGT TTGTAGAGGC TTTTATTACG
CCTCAGATTA TACATTTAGT CAGTTAA
 
Protein sequence
MSERPLNRYI IFAAALFFTS FIVGIVMVRL DPSIGTSMIA AFRDQVVKQI MNDQTGILCL 
KILLNNLVAC LVLFLGGVTA GIISLVVLGA NGVLIGAVLE MVRSQRGVLY VAAAILPHGI
FEIPAFLISA ALGFMLAGAL VGDWHGNEDA GDTTRRLGRI FLSVVVPLIV VAAFVEAFIT
PQIIHLVS