| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0828 |
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| Symbol | |
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| ID | 7272318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 850632 |
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| End bp | 853142 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643569477 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
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| Protein accession | YP_002465913 |
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| Protein GI | 219851481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.241556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT CGGTTATTGC CACAGTGGTT GAGAACGGTC TCTGCATCGG CTGTGGTCTC
TGTGCAGCCC TCTGTCCGAC CGGATCGCTG ACAATGCAAT GGAACCTAAA CGGCGAGTAC
AACCCGAAAG AGACGAAGCC GTGCACGATC GCGTGCGGCC TCTGCCTGAG GATCTGCCCC
TTTGCCGATA CGGGTGAAGA CGAGGATTCG ATTGGGAAAG GACTCTATGG GGGTGTGCCG
GGGATCGACC ACCGTCCGGA GACCGGCTAC TACCTTGCCG TGTACAGGGG TTACTCGGAG
CGGTATCGGC CGGCAAGTTC CTCGGGTGGG GTGGCAACCT GGATCCTGGA CTCTCTGCTC
GCTGCGGGTG TCGTCGACCA TATCGTCTGT GTCGTTCCCA CCGGTGACCC GGAGAGACTC
TTCGCTTTTC AGGTCTTCGA GACTCGGGAG GACGTGCGCT CAGGCGCCGG CTCGGCATAT
TACCCGGTTG AACTGTCTGC AGTCGTCAGA CATATCCTCG AAACACCGGG ACGGTATGCC
GTCACCGGCC TGCCCTGCTT CATCAAGGCG ATCAGGCTCG CACAGCAGAG AAACGCAACG
TTACGGGAGC GAGTCGTCGT CTGTGTCGGC CTCACCTGCG GGCAACTGAA GAGCAGGCAC
TTCACTGATT ACATCGCCTC CCTTGCTGGG GTGACGGGGA AGGTGACGGG GGTGTGCTAC
CGGGGGAAGA GCCCGGACCA GCCGGCGAGT AATTATCACT ATCGTTTCAC CACCGCTGAC
AGGAATGAAC GAAAGATATT CTGGAACGAT GGGATTGCCG AGGCATGGAC AAATCTCTGG
TTCACTCCGA AGGCCTGCTG TTACTGTGAC GATATCTTCG CCGAGTGTGC CGATGTGACC
TGTATGGATG CCTGGTTGCC GGAGTATTCG AGGGATTATC GAGGGACAAA TCTGGTGATT
ATACGGTCGC CCCTGCTCCA GGATCTCATC TCAAGGGGTA TAATGGATGG AGAACTACAA
GCAGATCCTG CTCATATTCA GGATGTCATC CGCAGTCAGG CTGGGGTTAT AGAATTCAAG
CGGCGCTCTC TGACATATCG ATTGCATCTT GGTTTGAAGA GAGGGGAGAA GGTCCCGGGA
AAGCGGGTTG GCCCCGAAAG ACCGCCTCGT TTCATTCAGC GAGAGGTCGT TATGAAAGAC
CATGTGCGTG CGTCAGTTCA GAGCCTGTGG ATAAAAAACC CGAGTGCAGA ACACCTCAGA
GAGAAGATGT GGTTGAGTAT GAAACTGTTA GCATTCAGAA GCCGAATGAT CAGGATAATA
ACATTGCCGA TGAGAGGAAC GAGACATATT TATCGTACGA AAATCCCGGG AATTTTAAAG
AAAAATTCCA TTAATGATTC TTATATACAA TCCCCCTCCC ATGCGACGAT ACTTCAAAAC
GCCCGCGAAT CTTTGAATAT CCCGACATAT GATGGATCAA ATCAGATGGT TCATCCCTCG
GTCATAGATT TTCTTGCAGA GCACGGTCTC CCTCAGTGGG GAGGTTTCCG CTTCTGGATG
GTGATCACAC CGTATCCCTA TGGTAATGAT GCCTCCGAGA ATCCATCCAT CTATACCAGT
AACGATGGAA TAAACTGGTT TGTACCACCC CGTATCAACA ACCCGATTGA TTATGCACCC
GGAGGATGGG ATCAGGGGTT CAATAACGAT CCGGATATGG TGTATGATCC CGACCAGGAT
GAGATTCGTG TCTATTTCAG ATTTGCATCC ACCGATCACC TGAACGTGAA ACTCGTCAGA
ATATCGAATG ATCACGGTGT CAGTGAACCA ATTACGGTGA TATCCCAATC TCCATGGACT
CAATCGGATA ATACCCACCG TTCGCTCTGT ATCTGGAGGG AATCATCCCG TCGATGGCAT
ATGTGGGGTG GGGGAGGAAC AAAAACTCCG CCATACAATC TCTTCTATCG GTTCAGCGAG
GACGGGATTC ATTGGGAATC CCCCATCATC TGTCTGAATG ATGAAGGGAA TGATCCCTTT
CAGGCTCTGG GTTACTCAAG CTGGCATATC TCCTGTAAAC CCAATTATTG TGAAGATCGG
ATAGAATTTT TAAGTTATGC AACACCGGTT TCATCAGAAG GTAAAGGAGT CCTTCTCTAT
GCCGAATGCT CTATGGGGAG TCCAACGCTT TTTCGAACTC CGATTGTTCA ACCTATCCTA
CGCCCCTCGG AGTATGGTTG GGACAACGGC ACCCTCTATC GGTGCAGTTT TTGCATAACC
AACACGGGGG GTTGTTATTA TTACCGAATC TGGTATTCTG CAGAATCCCA TAACAATATC
TGGAAACTGG GGTATACCGG GGGGTATATT GGAACTGAAT ACAATAATGA CCAGAAATCA
CCGGTTCATG AAAAGAATGG AGAACCAACG TCTTGTCATG GGAGATTCCG TGATTCCATC
CAGGATCTGC ATTGTTCTTT TCATTCGAGG GACACGGGAG GTGATTTCTG A
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| Protein sequence | MKSSVIATVV ENGLCIGCGL CAALCPTGSL TMQWNLNGEY NPKETKPCTI ACGLCLRICP
FADTGEDEDS IGKGLYGGVP GIDHRPETGY YLAVYRGYSE RYRPASSSGG VATWILDSLL
AAGVVDHIVC VVPTGDPERL FAFQVFETRE DVRSGAGSAY YPVELSAVVR HILETPGRYA
VTGLPCFIKA IRLAQQRNAT LRERVVVCVG LTCGQLKSRH FTDYIASLAG VTGKVTGVCY
RGKSPDQPAS NYHYRFTTAD RNERKIFWND GIAEAWTNLW FTPKACCYCD DIFAECADVT
CMDAWLPEYS RDYRGTNLVI IRSPLLQDLI SRGIMDGELQ ADPAHIQDVI RSQAGVIEFK
RRSLTYRLHL GLKRGEKVPG KRVGPERPPR FIQREVVMKD HVRASVQSLW IKNPSAEHLR
EKMWLSMKLL AFRSRMIRII TLPMRGTRHI YRTKIPGILK KNSINDSYIQ SPSHATILQN
ARESLNIPTY DGSNQMVHPS VIDFLAEHGL PQWGGFRFWM VITPYPYGND ASENPSIYTS
NDGINWFVPP RINNPIDYAP GGWDQGFNND PDMVYDPDQD EIRVYFRFAS TDHLNVKLVR
ISNDHGVSEP ITVISQSPWT QSDNTHRSLC IWRESSRRWH MWGGGGTKTP PYNLFYRFSE
DGIHWESPII CLNDEGNDPF QALGYSSWHI SCKPNYCEDR IEFLSYATPV SSEGKGVLLY
AECSMGSPTL FRTPIVQPIL RPSEYGWDNG TLYRCSFCIT NTGGCYYYRI WYSAESHNNI
WKLGYTGGYI GTEYNNDQKS PVHEKNGEPT SCHGRFRDSI QDLHCSFHSR DTGGDF
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