| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0817 |
|---|
| Symbol | |
|---|
| ID | 7272307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 836525 |
|---|
| End bp | 837826 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643569466 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465902 |
|---|
| Protein GI | 219851470 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.684309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCA CGCGGAGGGC CTGGGGGATC ATCATCCTCG CTTCAGCACT TCTCCTCTGT
GCACTGATAT TTGACGATCG TTCCTGTCTC ATCGCTTCAT CAGTTCTCGG ACTCTTCCTC
CTATATCGTG TGATCGTCTT CTCTCGTTCC GTGACAGATA TCCTCTCATC CCTCAACTTC
ACAAGAACCG TGGATAAATC GGTGATCCGG CAGGGAACGA TGCTCGAGGT CTCTGGAACC
GTTACACTGA AGAACCATTC ATCGTGCCGG GTGGAAATCA GCGATATTCC ACCAAAAAAC
AGTCAGATGA TAAAAGGGAA CACAGTATTC ACTGCAGGCG GTGTCGACCG AGAGACTCTG
ATGGGAACGT ATCAATTATC CCTCTCCTCT TCAGGATTTC TGTCATTCGG CGGCATCAAA
TGCCGGATTG ACGATCGGTT CTTCTCCAAT ATCGTCATCA TGGGGGAGAA GGCATTCCAG
GCACCGGAAC TGTTTGTTCA GGTGTCGCCC ACCTTTGCTC TGATGAAGGG ATATGGGTTC
GGTCCGCGAG AGAACGATCA TCAAAACAGC GGTTTCAAAG GAACGGGCAT CCTGTCATTT
CGAGAATACA GGGCAGGAGA CAACCTCCGT TCTGTCGACT GGAAACTCAC TGCAAAGTTC
AATAAAAAAT ATATCAGAGT CCATGGAGAT ACAGCAGATG ATACACCCCT CATCGTCGCC
GACCGACCGG ATGAGATCAT CCCGGGGAGT GACGGGGTTC GGCAGATGCT CACATCAGCA
GTCGCCAGTG CCATTGAACA CGCAATCCAG GAGTATGGTT CATGTTCGCT GGTGGTCATA
TCCGGACCGA ATATCCTAAA CATGCAGAAT AAAAGCCGGG ATATCCGGGC AATGGAGCAG
ATGGTGGGGG GATTCGCCCC TTTCGATCGC CTTCATCGCC TGTACCGATC GTATTATGCC
GCCCGGACTC TCTCTTCCTT AACCAGAACC GACCAATCAG ATCTCTCGGA AGAGGTCAGG
ATCTATCATA ATCGGGTGGA AGGTCTTCTC CGTTCCTCGA CTCAGGTAGC TGGACCCACA
TCCTTTGAGT GGGAACTGAA CCGTATCGTC GAGGCTTCGC GGAACTCCAG GGTCTATTAT
TTCGGGTTCT GTGAGGGAGA TCTCAGCCAC ATCTGGATGT TGCTTCTCAC CACACTGAAG
TTTGGGACGA GGGTTTCGCT CTCACTCCCC GATAGTCCCC GCTGCAGGAG AATGACGGAC
TTCCTCGCGT TTGATCATGT AACCCTGGAG ATGATGCGAT GA
|
|---|
| Protein sequence | MQPTRRAWGI IILASALLLC ALIFDDRSCL IASSVLGLFL LYRVIVFSRS VTDILSSLNF
TRTVDKSVIR QGTMLEVSGT VTLKNHSSCR VEISDIPPKN SQMIKGNTVF TAGGVDRETL
MGTYQLSLSS SGFLSFGGIK CRIDDRFFSN IVIMGEKAFQ APELFVQVSP TFALMKGYGF
GPRENDHQNS GFKGTGILSF REYRAGDNLR SVDWKLTAKF NKKYIRVHGD TADDTPLIVA
DRPDEIIPGS DGVRQMLTSA VASAIEHAIQ EYGSCSLVVI SGPNILNMQN KSRDIRAMEQ
MVGGFAPFDR LHRLYRSYYA ARTLSSLTRT DQSDLSEEVR IYHNRVEGLL RSSTQVAGPT
SFEWELNRIV EASRNSRVYY FGFCEGDLSH IWMLLLTTLK FGTRVSLSLP DSPRCRRMTD
FLAFDHVTLE MMR
|
|---|
| |