Gene Mpal_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0706 
Symbol 
ID7271852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp703355 
End bp704569 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content57% 
IMG OID643569351 
Productsodium/hydrogen exchanger 
Protein accessionYP_002465795 
Protein GI219851363 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.584868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC TCTTTATTTC GCCGGAATTC CAGATGAGCC TCCTGTTGTT TGTGGCCCTC 
GGGGGGTATC TTATTGCATC ACGCATCAAC CAGTCCGCGG TGATCGGGTT GATCCTCGTC
GGGATCCTCG TCGGCCCCAG CGTCCTGGGC TGGATCACCT ACACAGACTT TATCCAGAGC
CTCGCCCACC TCGGAGCGGT CATACTCCTC TTTGTCATCG GGTTTGAGTT CAACCTTCGC
GAGATCATAC ACCCCCGTAA CTTTGCCATC GCCCTGGTGG GGGTGATCGT GCCATGGTTC
TGCGGTTGGG AGCTTGCCAT CCTCTTCGGC TACAGTTCAG CCAGTGCGAT CTTCATCGGC
ACCGCCCTGA CCGCCACCAG CATCGCCATC ACGGCGAATG TGCTCAGAGA GTTGGATAAA
CTTCATACCG CGGCAGCCAA AGCGATCATC GGGGCTGCGG TCATCGATGA CGTCCTCGCC
CTGATCGTCC TCGCCATCAG TACCGCCGTC GTCAACGGCT CGTTCTCATA CTGGGGAATC
GCCCTGATCA CAATAAAAGC ACTGCTGTTC ATCGTCATCG GCGCCGCGTT CGGAACCCTG
GTGATCGGCA GATATCTCGT CCGCCTCGAC AGGACCGATT TTGTGAAGAG GTTCCCCGAG
TTCATCTTCA TCTTTGCCAT GATGTTCGCC TTCTTCTATG CCATCTGCGC CGAGATGGTC
GGGCTCTCAA CGATCATCGG CGCATTCATC GCCGGTGTCT CGTTCAAGGA TGTGGAGTTG
AACCAGAGTA AAAGTCTCAA GGAAGGGGCC GAGTATCTCC AGATCATCTT TGCATCGATC
TTCTTTGTCT CGCTGGGGGT CCTTGTTGAC CTCCGGGCAG TCACCCCGGA GATCCTGGTC
TTCCTCGTGG CGCTGACGAT CGTAGCGATC ATCAGCAAGG TCATCGGGTG CGGACTTCCC
GCCCGGCTCG GAGGAATGAA CAGGAAGGAC TCCCTGATCA TCGGTTTCGG GATGGCACCC
CGTGGGGAGG TGGCGATGAT CGTGGCACTG ATCGGGCTCA ACGCCGGCAT CATCGATCAG
GGAGTGTATG TCGTCCTCGT GATCATGAGT CTGCTCACGA CGGTGATCAC CCCCATCATC
TATCGGAACT GGTTCTACAG AGGAGAATAC GGCACCTATG ATGCCAGCGG GGCCTGCATC
AATTCAGGAG ACTGA
 
Protein sequence
MEDLFISPEF QMSLLLFVAL GGYLIASRIN QSAVIGLILV GILVGPSVLG WITYTDFIQS 
LAHLGAVILL FVIGFEFNLR EIIHPRNFAI ALVGVIVPWF CGWELAILFG YSSASAIFIG
TALTATSIAI TANVLRELDK LHTAAAKAII GAAVIDDVLA LIVLAISTAV VNGSFSYWGI
ALITIKALLF IVIGAAFGTL VIGRYLVRLD RTDFVKRFPE FIFIFAMMFA FFYAICAEMV
GLSTIIGAFI AGVSFKDVEL NQSKSLKEGA EYLQIIFASI FFVSLGVLVD LRAVTPEILV
FLVALTIVAI ISKVIGCGLP ARLGGMNRKD SLIIGFGMAP RGEVAMIVAL IGLNAGIIDQ
GVYVVLVIMS LLTTVITPII YRNWFYRGEY GTYDASGACI NSGD